FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77294
Sequences flagged as poor quality0
Sequence length150
%GC50

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4022852.045436903252515No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG36984.784329960928403No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA33634.350919864413797No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG19812.5629414961057777No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT13941.8035035060936166No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT8081.0453592775635883No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG6420.8305948715294849No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA4990.6455869795844439No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA4720.6106554195668487No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC4590.5938365202991177No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT3930.5084482624783295No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC3900.5045669780319301No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG3620.4683416565322018No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCCACCCAGCCAGCCAAGCCAG3310.4282350505860739No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG2950.3816596372292804No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAAGTGGGGAAAGGACA2950.3816596372292804No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA2910.3764845913007478No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGGTCCCATCTCAAGTCTCACTC2710.3506093616580847No Hit
CATAGAAGCAGCATTGATCATCCTCCAGAAGCAGCATTTTAACACAGCAT2670.34543431572955213No Hit
CATAGAAGGTGATAATCATGACAGCCAACCACCACCCAGTACAGGAGCAC2150.2781587186586281No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2140.27686495717649495No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2000.2587522964266308No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG1990.2574585349444976No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1870.24193339715889978No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1790.23158330530183455No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT1780.2302895438197014No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1700.21993945196263617No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG1660.21476440603410354No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1640.21217688306983726No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1620.20958936010557092No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1610.20829559862343777No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1550.20053302973063888No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1530.19794550676637254No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1480.19147669935570677No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGTTCTTAAACAAAGCAAACA1370.17724532305224208No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG1350.17465780008797577No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1320.1707765156415763No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1300.16818899267731002No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1280.1656014697130437No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1270.16430770823091054No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1250.16172018526664425No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1240.16042642378451108No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1200.15525137785597848No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1060.1371387171061143No Hit
CATAGACTACCACTACCCAGCACAGCGTGAGGACTTGCCCAGCCACCCCA1000.1293761482133154No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG1000.1293761482133154No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA990.12808238673118225No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG960.12420110228478277No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA960.12420110228478277No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG950.12290734080264963No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG930.12031981783838333No Hit
CATAGAGGTGCGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA920.11902605635625016No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATAACAGGCG900.11643853339198386No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC890.1151447719098507No Hit
CATAGAGAATACAATGAACTGTGATGGCACATGCCTAGCCATTTTTGGTT890.1151447719098507No Hit
CATAGACATGAGTGGCCGAACAGACCTGCTAATTGGCCTCCGTTCTAATG870.11255724894558439No Hit
CATAGACCATCCTCCCACCTTGACCTCCCGAGTAGCTGGGACTACAGGTG850.10996972598131809No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA840.10867596449918493No Hit
CATAGACCATCCTCCCACCTTGACCTGTCTCATAGAGTTTTGCTTCCCTG810.10479468005278546No Hit
CATAGACCATCCTCCCACCTTGACCTGCCAAGTAGCTGGGACAACAAGCA800.10350091857065233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)