FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99307
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3481835.06097253970012No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG43454.375320974352261No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC31073.1286817646288783No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT21792.1942058465163585No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG20852.0995498806730644No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA15521.5628304147743866No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA12951.3040369762453805No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT12371.245632231363348No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA12261.2345554694029626No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT11611.1691018760006846No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT11161.1237878497991078No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACTGGAGCTTCCGCAGAGCCCCCT10891.0965994340781615No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT8510.8569385843898214No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACTGGAGCTTCCGCAGAGCCACCT8000.8055826880280342No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT7860.7914849909875437No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT7850.7904780126275086No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG7030.7079057871046351No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT6450.6495010422226026No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGAGGAT6360.6404382369822872No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTATCCTCTTGCCTCCGTCCCTCTA5900.5941172324206754No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT5800.5840474488203249No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA5540.5578660114594137No Hit
CATAGAAAGTCTGGACCAAGTGCCTCAGTGTCAGACAGGATGCGCAGATG5510.5548450763793086No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA5470.5508171629391685No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTGACGACATGGTTCTACA5060.5095310501777317No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC4990.5024822016574864No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC4730.47630076429657525No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT3920.39473551713373684No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC3920.39473551713373684No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA3850.3876866686134915No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3290.33129588045152913No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT3230.32525401029131884No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTGACTGTGTTAATTTAAAAGA3210.32324005357124874No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2860.28799581097002225No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2850.2869888326099872No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT2600.26181437360911114No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2580.25980041688904104No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2550.25677948180893595No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCGAAGA2310.23261200116809488No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2290.2305980444480248No Hit
CATAGAGCTATCTGGCAAAAACCCATCGTCAGTGTGGTATATTTTCTAAA2260.2275771093679197No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2240.2255631526478496No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTGACCCCTGTAATCCCAGC2190.22052826084767435No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT2180.21952128248763936No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT2160.21750732576756923No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTCCTTTGTTGAAGA1980.1993817152869385No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACAGTTCATTGTATTCTCTATGAG1970.19837473692690344No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCGTCCCTCTATGAGACCAAGTCTA1840.18528401824644788No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1830.18427703988641284No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1830.18427703988641284No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT1790.18024912644627267No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1750.1762212130061325No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1720.17320027792602738No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCAGGGACACAATAGTTTATTCACA1720.17320027792602738No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC1630.16413747268571197No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1620.16313049432567694No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1560.15708862416546668No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTGCCATGATTGTAAGT1490.1500397756452214No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC1490.1500397756452214No Hit
CATAGAGCTATCTGGCAAAAACCCATCACACTGAGGTCAAGGTGGGAGGA1450.14601186220508122No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1420.14299092712497607No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTGGAGGATGATCAATGC1410.14198394876494105No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1370.13795603532480086No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT1360.13694905696476584No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGTCTATGAGACCAAGTCTCTG1310.13191416516459062No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCGCTTCTGTAATCTCAGC1290.12990020844452052No Hit
CATAGAGGTGTCCTTTCCCCACTTTAGGTTTTTGTTTGCTTTTTCAATGA1290.12990020844452052No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACAGGATGCGCAGATGGTCT1270.12788625172445042No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1270.12788625172445042No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1260.1268792733644154No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1250.12587229500438035No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACTTGTAATCCTAGC1240.12486531664434532No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG1230.12385833828431027No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1230.12385833828431027No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATGCCATGATTGTAA1190.11983042484417009No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1190.11983042484417009No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1160.11680948976406497No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1150.11580251140402993No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1110.11177459796388976No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTTACTCCTGTAATTCCAGC1080.10875366288378462No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGACGACATGGTTCCATGTG1060.10673970616371453No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1060.10673970616371453No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGTTATG1050.1057327278036795No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGCTTTTGTTTGCTTTGTAGAAGA1040.10472574944364445No Hit
CATAGAGCATTACCCTCAAACTATCCCTACCCTCAAACTATCCCTACCCT1040.10472574944364445No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTGGTGGCCTTACCTCAAATG1010.10170481436353933No Hit
CATAGAAAATAATGTGGCCGGGCATGGTACCTCACGCCTATAATCCCAGT1000.10069783600350428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)