FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82170
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2131025.934039187051233No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT71098.651576000973591No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG52836.429353778751369No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG41625.065108920530608No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC34934.2509431666058175No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG33464.072045758792746No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG22742.7674333698430083No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG16051.9532676159182183No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT15781.9204089083607156No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT14531.768285262261166No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG14251.7342095655348666No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT12351.5029816234635511No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT8040.9784592917123037No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA7650.9309967141292442No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC6970.8482414506510892No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA6250.7606182304977486No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT6000.7301935012778387No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT4520.5500791042959718No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG3840.4673238408178167No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC3730.4539369599610563No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG3640.44298405744188873No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT3510.42716319824753557No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGTCAGTGTGGTG3380.41134233905318246No Hit
CATAGATGGCAAATGGTGGGATCTCTGTAGCAGAGCCCGTTCTCTCTGTT3070.3736156748204941No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT2680.3261530972374346No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTTACAAAAATTGGGA2480.3018133138615066No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT2390.29086041134233903No Hit
CATAGATCTAGCCCATCACTTCAGCATAGATGCCTGGCCAACTGTTTTTT2130.2592186929536327No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT1990.24218084459048314No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA1990.24218084459048314No Hit
CATAGACCAGTACGCCTTACCCCTTGTACGGTAGCAGAGACTGTTAATAT1790.2178410612145552No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG1770.2154070828769624No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG1720.2093221370329804No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC1650.2008032128514056No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT1630.1983692345138128No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1610.19593525617622004No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTAGCCCGTTCTCT1580.19228428866983086No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATAGCAGGCCCTTCAGCATCATT1560.18985031033223804No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT1510.18376536448825606No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTGACTGTTA1500.18254837531945967No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC1470.17889740781307045No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1440.17524644030668127No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT1440.17524644030668127No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTATGTGCTC1420.17281246196908848No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTGCAGGCCCTTCAGCATCAT1400.1703784836314957No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC1390.1691614944626993No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG1350.16429353778751368No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGACTGTTAATATAGAA1320.1606425702811245No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1320.1606425702811245No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC1300.1582085919435317No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGTCAGTGTATGA1250.15212364609954973No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACCTCCTCTATGTGT1250.15212364609954973No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG1200.14603870025556773No Hit
CATAGATGGGACAGCGACAATGACAGTTAGTGGGACAGCATCTGGGTCTA1190.14482171108677133No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1190.14482171108677133No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG1160.14117074358038212No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGCCTCTCCAGTTTCTACGTGATCT1100.13386880856760375No Hit
CATAGATGGGACAGCGACAATGACAGTGTGCAGGCCCTTCAGCATCATTT1070.13021784106121456No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGAGACAGTTGTGGAAAGTGCA1040.12656687355482535No Hit
CATAGATCTAGCCCATCACTTCAGCATTCCAAAGTGCTGGGATTACAGGG1030.12534988438602895No Hit
CATAGATTCAGAGAAGGACAGCGTGGGACAGCATCTGGGTCTATGTGTAG1010.12291590604843618No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTACAACCATGT940.1143969818668614No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG890.1083120360228794No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAGCAGGCC880.107095046854083No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT870.1058780576852866No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTGTAAAGGC860.1046610685164902No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTAGGCCCTTCAGC840.1022270901788974No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG830.10101010101010101No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)