FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences148464
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG87005.860006466214031No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT74975.049709020368574No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT66884.504795775406833No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG56163.7827352085354025No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT44863.021607931889212No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT44342.9865826058842546No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT41382.7872076732406508No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT39032.6289201422567086No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT34002.290117469554909No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT26671.796395085677336No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG22961.5465028559111973No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC19661.3242267485720443No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG19611.3208589287638755No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT17701.1922082120918203No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT16411.1053184610410605No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT16391.103971333117793No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT15341.0332471171462443No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG15161.021122965836836No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAGTGCACAGTTTGGAATGA15001.010345942450695No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT13450.9059435283974565No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT13000.8756331501239358No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA11990.8076031899989223No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT11940.8042353701907532No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC11820.7961526026511477No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG11800.7948054747278801No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG11750.7914376549197112No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC11590.7806606315335705No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT10950.7375525379890074No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAAGCAGCAAACAATTTCAG10710.7213870029097963No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG10610.7146513632934584No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT10140.6829938570966699No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC10000.6735639616337967No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT9650.6499892229766139No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC9300.6264144843194309No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT8680.5846535186981355No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT8380.5644465998491216No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC8310.559731652117685No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG8290.5583845241944175No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC8220.553669576462981No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT8100.5455868089233754No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA7590.5112350468800517No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATGGCGTGTATGTGAG7420.4997844595322771No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC7300.4917016919926716No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA7200.4849660523763337No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC6600.44455221467830586No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC6520.43916370298523544No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC6510.43849013902360173No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT6270.42232460394439053No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCCAAGTAAGTCT5760.38797284190106696No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTAGGTGGCTTCTGGTGCAT5760.38797284190106696No Hit
CATAGACTCAGAACTGGCTCTAATTCCTACGGTAGGTGGCTTCTGGTGCA5650.38056363832309514No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT5600.3771958185149262No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5550.3738279987067572No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT5520.3718073068218558No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT5520.3718073068218558No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT5470.3684394870136868No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTATGACTTTACCCTGGC5420.36507166720551787No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTTTTACAAACTCAAGTGAT5210.3509268240112081No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGAAGGTAGGTGGCTTCTGGTGCAT5140.3462118762797715No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTAGCAGAGTGGGAGTCATT4950.3334141610087294No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT4920.331393469123828No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGTAGAACACATGTACACGGCAGG4810.32398426554585624No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG4640.3125336781980817No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT4590.30916585838991273No Hit
CATAGAACTAGTTCCAGCACCACCAGCATTCTTTCTCCAGACCTTCATCT4430.29838883500377195No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTCAGTTAGGCTACTT4330.29165319538743395No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4220.28424399180946225No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3910.26336350899881456No Hit
CATAGACTTGTTGCCGAGACTGGAGTGAACTTTCCCACCGCCCTTTTCTA3910.26336350899881456No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3860.25999568919064553No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT3840.25864856126737795No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3770.2539336135359414No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAAACCTGTGTGTGT3770.2539336135359414No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGACACTTGAAAGCTCCCTGGATC3690.248545101842871No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT3440.23170600280202608No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCTCCCTCTCTCACACATCTAT3410.22968531091712469No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA3380.2276646190322233No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGTCCTCTTCACCTCCCAGAT3290.22160254337751914No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGTTGATTTAGGAAGCA3270.22025541545425154No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3200.21554046772281496No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCATAGATGTGGTTGCATGGGGG3140.21149908395301217No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTTGCAGGATGAATGGGGAC3120.21015195602974457No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAGCAGTTAGGCTAC3120.21015195602974457No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGAACTTTCCCACCGCCCTTTTCT3090.20813126414484318No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG3060.20611057225994178No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTAGCAGAGTGGGAGTCAT3010.20274275245177284No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2970.20004849660523763No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2940.19802780472033626No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG2920.19668067679706863No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT2860.19263929302726587No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2750.1852300894492941No Hit
CATAGAACTGACCATACACTTGCCCTTCCCAGTTAGGCTACTTGGGGGTC2620.17647375794805475No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG2550.17175881021661818No Hit
CATAGATCTACTCCTACAATCTTGGCAAAACCTGTGTGTGTAAGTGGGTC2550.17175881021661818No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT2480.1670438624851816No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2470.16637029852354782No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTAGAAAAGTGCACAGTTTGGAAT2460.165696734561914No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGGTGGCTTCTGGTG2340.15761396702230843No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGAGCCGTTTCCCCCATACT2300.15491971117577327No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCATAGATGTGGTTGCATGGGG2250.15155189136760425No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2200.14818407155943528No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGAAAGAAAACCCACAAAAGACGT2170.14616337967453388No Hit
CATAGAACTGACCATACACTTGCCCTACGGTAGGTGGCTTCTGGTGCATC2140.14414268778963252No Hit
CATAGATCCATGGTGTGCAAGGACAATGTTTGCTATTACGAGGATGCTCT2090.14077486798146352No Hit
CATAGAACTGACCATACACTTGCCCTTACGGTTGCAGGATGAATGGGGAC2080.1401013040198297No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG2060.13875417609656213No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT1930.12999784459532276No Hit
CATAGACGTGTGGTTGGGATGTCAGCAGCTCCTCTTCTCTTCCCTCTATG1900.1279771527104214No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA1890.12730358874878758No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1850.1246093329022524No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT1820.122588641017351No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGAAGAGAATGTTGATTTAGGAA1810.1219150770557172No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTATTCTGGTTGCAGGATGAAT1800.12124151309408343No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG1780.11989438517081583No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1700.11450587347774543No Hit
CATAGAACTGACCATACACTTGCCCTACGGTTGCAGGATGAATGGGGACA1690.11383230951611165No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAGGTAGGTGGCTTCTGGTG1670.11248518159284406No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1660.11181161763121027No Hit
CATAGAACATCTCCCTGTTCCTCCCATACGGTTGCAGGATGAATGGGGAC1640.11046448970794268No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTTGCAGGATGAATGGGGA1640.11046448970794268No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1620.10911736178467507No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGAATCTATGAGACCAGGCATTCT1610.10844379782304128No Hit
CATAGAAAAGGGAGGGATTACGGGTGATTTTGGGTAGAATCTTGAACTCA1610.10844379782304128No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATGTCGTCAGTGTGCG1580.10642310593813988No Hit
CATAGAGAAGCCAGGGAACAAAGTGGTACGGTTGCAGGATGAATGGGGAC1570.10574954197650609No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCAGGGCTGCATGGTGACTTTTC1540.10372885009160471No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1510.1017081582067033No Hit
CATAGAGCAGAATTTTGGGGAGAGGGAGAGACAGGGGTGTGGTGTTCTGT1500.10103459424506951No Hit
CATAGACTGGCTATTGTTTGGTTTGTACACGGCAGGGCTGCATGGTGACT1490.10036103028343572No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)