FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807267

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807267
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6247
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG181829.101968945093642No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA3215.138466463902673No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC2443.9058748199135587No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC2413.8578517688490472No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG2153.4416519929566194No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG1692.7052985433007843No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG1272.032975828397631No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG1101.7608452056987351No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT1031.6487914198815432No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA1021.6327837361933728No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT931.4887145829998398No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC811.296622378741796No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA711.1365455418600927No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG681.088522490795582No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC641.0244917560429005No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT631.0084840723547304No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA610.9764687049783897No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC580.9284456539138788No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT500.800384184408516No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT470.7523611333440051No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA450.7203457659676645No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT440.7043380822794941No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG360.5762766127741316No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT340.544261245397791No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA320.5122458780214503No Hit
CATAGAGCTTGGGTGCGAACATCAACTACGCTATACCACACTACACACTC250.400192092204258No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG210.33616135745157677No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT190.3041459900752361No Hit
CATAGATCATGGGACTTCAGCATGGCCTGACGACATGGTTCTACACATAG180.2881383063870658No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG170.2721306226988955No Hit
CATAGATCATGGGACTTCAGCATGGCTGGAGACAGCCGCTCACCTCTATG170.2721306226988955No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT170.2721306226988955No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG170.2721306226988955No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG160.25612293901072514No Hit
CATAGATGGCCAAGATACGAGCACATGTCTCATAGACCAGTACGCTATAC150.24011525532255484No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGCTAATCTGAAATCTTCGTGT140.2241075716343845No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGACATGGTTCTACA140.2241075716343845No Hit
CATAGAAAAAACAGTTGGCCAGGCATTGCTTCTTGTGGTAACTGGTCTAT140.2241075716343845No Hit
CATAGAGCTTGGGTGCGAACATCAACACACTGACGATCATTGTTCACTGC130.20809988794621417No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG130.20809988794621417No Hit
CATAGATCATGGGACTTCAGCATGGCCTCATTGCTTCTTGTGGTAACTGG130.20809988794621417No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGGAGACAGCCGCTCACC130.20809988794621417No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG130.20809988794621417No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG130.20809988794621417No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT130.20809988794621417No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG130.20809988794621417No Hit
CATAGACCAGCAGACACTCCCATCATTGGAGACAGCCGCTCACCTCTATG120.19209220425804385No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG120.19209220425804385No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA120.19209220425804385No Hit
CATAGACCCAAGACCCCAGCCTTTACCCACCACACCCAGTTAATATGGTT110.17608452056987353No Hit
CATAGAGTCCAACTATTCCAGCACCAAGGGGTAAGGCGTACTGGTCTATG110.17608452056987353No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA110.17608452056987353No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC110.17608452056987353No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTTGCAGAAGTAGGAAGTA110.17608452056987353No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG110.17608452056987353No Hit
CATAGATGGCCAAGATACGAGCACATGGAGACAGCCGCTCACCTCTATGA100.16007683688170324No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGATCATTGTTCACTGC90.1440691531935329No Hit
CATAGATCATGGGACTTCAGCATGGCTTTGATAAAGGTGGAAGGGTAAGA90.1440691531935329No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG90.1440691531935329No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT90.1440691531935329No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG90.1440691531935329No Hit
CATAGACCCAAGACCCCAGCCTTTACGCTATACCACACTACACACTCTAT80.12806146950536257No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG80.12806146950536257No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG80.12806146950536257No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA80.12806146950536257No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA80.12806146950536257No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGCTATACCACACTACA80.12806146950536257No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA80.12806146950536257No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGGTGGAAGGGTAAGAGAGGGT70.11205378581719225No Hit
CATAGAAGGACAAAGACATTTAGGACCCATGGCAAGGGGTAAGGCGTACT70.11205378581719225No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT70.11205378581719225No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG70.11205378581719225No Hit
CATAGAGCTTGGGTGCGAACATCAACTTTTGTCATGCCCTACTTCCTTCT70.11205378581719225No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGGTTCTACACATAGAAATGATG70.11205378581719225No Hit
CATAGAGAAGACTCCCTCAACCCACCATGATGCTGAAGTGATGGGCTAGA70.11205378581719225No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC70.11205378581719225No Hit
CATAGACACAACAGAGAGAACGGGCTCCCAAGTATTAGAGCAAGTTGTTC70.11205378581719225No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)