FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807268

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807268
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6247
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA177228.36561549543781No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA3165.058428045461821No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC2453.9218825036017284No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG2443.9058748199135587No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG2163.457659676644789No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG1642.625260124859933No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG1342.145029614214823No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG1111.7768528893869058No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA1041.6647991035697134No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT951.5207299503761806No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT891.4246838482471587No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA801.280614695053626No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT751.200576276612774No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT671.0725148071074115No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG661.0565071234192414No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC620.99247638866656No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT600.9604610212902194No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC570.9124379702257084No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT510.8163918680966864No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT490.7843765007203457No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA440.7043380822794941No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT440.7043380822794941No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG380.6082919801504721No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG360.5762766127741316No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT330.5282535617096207No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT300.4802305106451097No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT280.448215143268769No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGTTGATGTTCGCACCCAAGCTC240.3841844085160877No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT190.3041459900752361No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG190.3041459900752361No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG180.2881383063870658No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG170.2721306226988955No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCCATGCTGAAGTCCCATGATCTATG170.2721306226988955No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG160.25612293901072514No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACTGGTCTATGAGACATGTGCTC150.24011525532255484No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA150.24011525532255484No Hit
CATAGAACACGAAGATTTCAGATTAGCCTTCCTTTCAATAGCCTTTTAGG150.24011525532255484No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGGCCATGCTGAAGTCCCATGA150.24011525532255484No Hit
CATAGACCAGTTACCACAAGAAGCAATGCCTGGCCAACTGTTTTTTCTAT140.2241075716343845No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG140.2241075716343845No Hit
CATAGAGGTGAGCGGCTGTCTCCAACACTGACGAATGAGGAAACAGGCAC130.20809988794621417No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA130.20809988794621417No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG130.20809988794621417No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT130.20809988794621417No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATATTAACTGGG130.20809988794621417No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTTGATGTTCGCACCC120.19209220425804385No Hit
CATAGACCAGTACGCCTTACCCCTTGGTGCTGGAATAGTTGGACTCTATG120.19209220425804385No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG120.19209220425804385No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGTTAATATAGAAGAGACACA120.19209220425804385No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC110.17608452056987353No Hit
CATAGAGGTGAGCGGCTGTCTCCAATGATGGGAGTGTCTGCTGGTCTATG110.17608452056987353No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAACACTGACCAACATGCTTTT110.17608452056987353No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG110.17608452056987353No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTGCTCGTATCTTGGCCATCTATGT100.16007683688170324No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC100.16007683688170324No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA90.1440691531935329No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA90.1440691531935329No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTTTCTACGTGATCTATGTGTAGAAC90.1440691531935329No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA90.1440691531935329No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGCAGGCCCTTCAGCAT90.1440691531935329No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA90.1440691531935329No Hit
CATAGACCCTCTCTTACCCTTCCACCTTTATCAAAGCCATGCTGAAGTCC90.1440691531935329No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA90.1440691531935329No Hit
CATAGAAATTTTTCAGAGACAGTTGTGGAAAGTGCAATGAGTCTATGTGT80.12806146950536257No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA80.12806146950536257No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT80.12806146950536257No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA80.12806146950536257No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC80.12806146950536257No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAAAGGCTGGGGTCTTGGGTCTAT80.12806146950536257No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG70.11205378581719225No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCCATGCTGAAGTCCCA70.11205378581719225No Hit
CATAGACCCTCTCTTACCCTTCCACCCTTCCTTTCAATAGCCTTTTAGGT70.11205378581719225No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT70.11205378581719225No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGCCCGTTCTCTCTGTTGTGTC70.11205378581719225No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTACGAATGAG70.11205378581719225No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGACA70.11205378581719225No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)