FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71506
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2650537.06681956758873No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG45756.398064498084077No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC22213.1060330601627837No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT20552.8738847089754707No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA19402.713059043996308No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA18232.5494364109305514No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG15602.181635107543423No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT11561.616647554051408No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG9441.3201689368724303No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA9391.313176516655945No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT9381.3117780326126478No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT8151.1397644952871089No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGACGACATGGAGGAT5620.7859480323329511No Hit
CATAGAACCAAAAATGGCTAGGCATGTGAAGAAGGACGTGTTTTCTTCCC4540.634911755656868No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA4390.6139344950074119No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4080.570581489665203No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT3730.5216345481498057No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGAGGATGATCAATGCTGCTTCTA3420.47828154280759655No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3360.46989063854781415No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC3290.46010125024473475No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG3070.42933460129219925No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2760.3859815959499902No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2760.3859815959499902No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT2560.3580119150840489No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2560.3580119150840489No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2520.35241797891086063No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGTCTATGAGACCAAGTCTCTG2430.33983162252118704No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2350.3286437501748105No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA2110.2950801331356809No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC2100.29368164909238387No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC2060.28808771291919555No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1990.27829832461611614No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC1960.2741028724862249No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1940.2713059043996308No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1870.26151651609655135No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1860.26011803205325423No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1780.24893015970687773No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1740.24333622353368947No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTCTGGAGGATGATCAAT1740.24333622353368947No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT1730.2419377394903924No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1720.24053925544709537No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT1670.23354683523061004No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1580.22096047884093642No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTTGAAGA1570.21956199479763938No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1470.20557715436466872No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1450.2027801862780746No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1450.2027801862780746No Hit
CATAGACACATGTAGGATGGGGTGGCCCCTGTCCCGGGTGCCACGAGGTC1330.18599837775850978No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC1280.17900595754202445No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1280.17900595754202445No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1250.17481050541213325No Hit
CATAGAGCAGACAAACTTGCAAAAGACTGGGCATTGCTCTTGACATCTCT1210.16921656923894499No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1170.16362263306575672No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1160.16222414902245966No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGACAGCCGCTCACCTCTATGAG1090.1524347607193802No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1080.1510362766760831No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1070.14963779263278607No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT1040.14544234050289487No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCTACA1030.14404385645959777No Hit
CATAGACACATGTAGGATGGGGTGGCTGCCATGATTGTAAGTTTCTTGAG1030.14404385645959777No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1020.14264537241630074No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG990.13844992028640954No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCGCTTCTGTAATCTCAGC970.1356529521998154No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC950.13285598411322128No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATCACAGTTCATTGTA930.13005901602662712No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT870.12166811176684474No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT870.12166811176684474No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG820.11467569155035941No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG810.11327720750706236No Hit
CATAGAAAATAATGTGGCCGGGCATGGTACCTCACGCCTATAATCCCAGT760.10628478729057703No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG750.10488630324727996No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG740.10348781920398288No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG740.10348781920398288No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTTACTCCTGTAATTCCAGC730.10208933516068582No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)