FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807276

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807276
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54935
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA718113.071812141621916No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA42037.650860107399654No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG34656.307454264130335No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG31805.788659324656412No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC25484.638208792208974No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG21173.8536452170747246No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG20483.728042231728406No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG17643.2110676253754438No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA16222.9525803221989624No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA11762.140711750250296No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC11642.1188677527987623No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT10201.8567397833803585No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT7931.4435241649221808No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT7901.4380631655592975No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA7711.4034768362610357No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT7631.3889141712933466No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT7001.274233184672795No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG6681.2159825248020388No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT4990.9083462273596068No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC4900.8919632292709565No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT4310.7845635751342496No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT4080.7426959133521435No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG3940.7172112496586875No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT3790.6899062528442704No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG3320.6043505961590971No Hit
CATAGACCAGTACGCCTTACCCCTTGCGAGTTTTGTTGATGTTCGCACCC3280.5970692636752526No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT2970.5406389369254573No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG2940.535177937562574No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG2730.4969509420223901No Hit
CATAGACCAGTACGCCTTACCCCTTGAGTACGCCTCTCCAGTTTCTACGT2660.48420861017566214No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT2610.4751069445708565No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG2360.42959861654682807No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT2350.4277782834258669No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2240.4077546190952944No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG2000.3640666241922272No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT1830.3331209611358879No Hit
CATAGATCTCCTCTCTGTAATGCACCAGTCGTCAGTGTAGCCCGTTCTCT1710.31127696368435426No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1630.29671429871666516No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC1570.28579229999089834No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCCATGCTGAAGTCCCATGATCTATG1570.28579229999089834No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGACCAACATGCTTTTAGTCACG1560.2839719668699372No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGTGTACGGTAAAGGCTGGGGTC1540.2803313006280149No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCCTAAATGTCTTTGTCCTTCTA1400.254846636934559No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAACATGCTTTTAGTCACGTCTATG1380.2512059706926367No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1280.23300263948302538No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT1240.22572130699918086No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA1240.22572130699918086No Hit
CATAGATTCTTTCCTGGCTGTGGGTGACACATAGATGCCTGGCCAACTGT1170.21297897515245287No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG1150.20933830891053062No Hit
CATAGATCTAGCCCATCACTTCAGCAGCCCGTTCTCTCTGTTGTGTCTAT1150.20933830891053062No Hit
CATAGATGGCAAATGGTGGGATCTCTATGCCATGCTGAAGTCCCATGATC1140.2075179757895695No Hit
CATAGATGACATGGGAAATTATGCTGCTCGCCATGCTGAAGTCCCATGAT1100.20023664330572497No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1050.19113497770091928No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1030.18749431145899698No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG990.18021297897515245No Hit
CATAGACCCTCTCTTACCCTTCCACCTTCCTTTCAATAGCCTTTTAGGTC940.17111131337034677No Hit
CATAGACCAGTACGCCTTACCCCTTGTATGCTTTATTCTCACGTGGATCT940.17111131337034677No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGAGACTGTCATTGTGGGTT900.16382998088650222No Hit
CATAGAGCAGCTTGAATTCTCCTCAGATACACATAGATGCCTGGCCAACT890.1620096477655411No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT840.15290798216073542No Hit
CATAGACCAGTACGCCTTACCCCTTGGTGCTGGAATAGTTGGACTCTATG810.147446982797852No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT760.13834531719304632No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGCTCGTATCTTGGCCATCTAT760.13834531719304632No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG720.13106398470920178No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC700.1274233184672795No Hit
CATAGAAGTATTCACACTGGGGCCCAGCCCGTTCTCTCTGTTGTGTCTAT700.1274233184672795No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT650.11832165286247383No Hit
CATAGATCTAGCCCATCACTTCAGCATGGCCATGCTGAAGTCCCATGATC640.11650131974151269No Hit
CATAGATGGGACAGCGACAATGACAGTGAATGATGGGAGTGTCTGCTGGT620.11286065349959043No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG600.10921998725766816No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG580.1055793210157459No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA570.10375898789478474No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)