FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences194087
Sequences flagged as poor quality0
Sequence length150
%GC34

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT2312211.913214177147362No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG137737.096302173767434No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG124846.432167017883733No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG114805.9148732269549225No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC72703.7457428884984565No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA71363.676701685326683No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG63373.265030630593497No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA51742.6658148150056418No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG51682.6627234178486967No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT49852.568435804561872No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA48582.503001231406534No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT43972.265478883181254No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG41092.11709181964789No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC37381.9259404287767856No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC35601.834228979787415No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT34201.7620963794586961No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG30321.5621860299762478No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA25731.325694147469949No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT22601.164426262449314No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC19911.025828623246276No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT19771.0186153632134043No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT17010.8764110939939306No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG15690.8084003565411387No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG13310.6857749359823172No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG12840.6615589915862474No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC12490.6435258415040678No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT12070.6218860614054522No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT11630.599215815587855No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCAGTCTTCAGCCCACCCATGCC10940.5636647482829865No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT10210.5260527495401547No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG9190.4734989978720883No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCCTGGGAGAAGAAATGTTG9120.4698923678556523No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT8470.4364022319887473No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT7530.3879703431966077No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG7110.36633056309799217No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG6120.31532251000839834No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT5870.3024416885211271No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG5840.30089598994265454No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA5790.2983198256452004No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCTGTTCTATGTTATAGAAAAC5610.28904563417436513No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT5380.2771952784060756No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC5090.2622535254808411No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT5010.25813166260491427No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG4830.24885747113407905No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC4740.24422037539866145No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT4350.2241262938785184No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCATTGTGGGTTTTAACT4210.21691303384564656No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA4020.20712360951532044No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA3930.20248651377990282No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCCATGCTGAAGTCCCA3880.1999103494824486No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA3840.19784941804448522No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT3460.178270569383833No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT3230.16642021361554354No Hit
CATAGATGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGCAACT3110.1602374193016534No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG3080.15869172072318086No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCAGACCCAGGCTACACA2860.1473565978143822No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG2700.13911287206252865No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCAATGAGTCTATGTGTA2650.13653670776507443No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT2620.1349910091866019No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTACAGTTGTGGAAAGTGCA2600.1339605434676202No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG2590.13344531060812934No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCAACATGCTTTTAGTCACG2510.12932344773220258No Hit
CATAGAAGTCTCGCTCTGTCATGCAAGTCCCATGATTTACCATCACAAAT2320.11953402340187647No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2260.11644262624493139No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG2250.11592739338544054No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC2070.10665320191460531No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG2070.10665320191460531No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG2050.10562273619562361No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCAGACTCTATGTGTAGAACCA1960.10098564046020599No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)