FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences185840
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC98665.30886784330607No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA92254.963947481704692No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA72193.884524321997417No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC70563.796814464055101No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA52772.839539388721481No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA52562.8282393456736976No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT51312.760977184674989No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA49742.6764959104606114No Hit
CATAGAGTCATTCCAAACTGTGCACTTCATTCCAACTCTATAGATTATGC45642.4558760223848473No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA43532.342337494619027No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG31751.7084588893671975No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT28001.506672406371072No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA27731.492143779595351No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT26901.4474817046922084No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT22771.2252475247524752No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA21931.180047352561343No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA21071.1337709857942315No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT20471.1014851485148514No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA19841.0675850193715024No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC18741.0083943176926389No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT17630.9486655187257856No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC17060.9179939733103746No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG16330.8787128712871288No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG15210.8184459750322859No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT14660.7888506241928541No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC14530.7818553594489883No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT14400.7748600947051227No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA13920.7490314248816186No Hit
CATAGATTGCCTCATTGTGCCAGACAAGCACATTATTATTGGTTGGTTCT13860.7458028411536806No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT13160.7081360309944038No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG13150.7075979337064141No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC10970.5902927249246663No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10920.587602238484718No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10860.58437365475678No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT10750.5784545845888936No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC10320.555316401205338No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA10230.5504735256134309No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA10210.5493973310374516No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT10000.5380972879896685No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG9860.5305639259578132No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG9580.5154972018941025No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG8760.4713732242789496No Hit
CATAGACCCCCATGCAACCACATCTATGACAATGGGCACACTTAACACCT8690.467606543263022No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTATAGCCTTCTCTGATAC8470.45576840292724924No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA8350.4493112354713732No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA8220.44231597072750756No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT8100.4358588032716315No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT8010.43101592767972446No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT7670.4127206198880758No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCACACTGATCTAGCTTCGGAATG7550.4062634524321997No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCAGGATGACTTATGGAATC7550.4062634524321997No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA7050.3793585880327163No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT6930.3729014205768403No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT6650.35783469651312955No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT6570.3535299182092122No Hit
CATAGATCATGAATGACTCCCACTCTGGGCCCATAATACACTTTTCTATG6190.3330822212656048No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC5770.31048213517003875No Hit
CATAGAGTCATTCCAAACTGTGCACTTACACTGATCTAGCTTCGGAATGT5620.3024106758501937No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT5520.297029702970297No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATACAATGGGCACACTTAACAC5340.287343951786483No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA5280.284115368058545No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG5270.28357727077055533No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5270.28357727077055533No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAATGAGGTTCTTCAACACAGC5060.27227722772277224No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT4940.26582006026689625No Hit
CATAGATTGCCTCATTGTGCCAGACATTGAGGATGACTTATGGAATCTGA4880.26259147653895826No Hit
CATAGACCATGTAATACCATCGTGAGCAGACACTGACGACAATGGGCACA4850.2609771846749892No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT4790.25774860094705127No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT4690.2523676280671545No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA4680.25182953077916487No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT4560.24537236332328885No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC4550.2448342660352992No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCCCTTTACCTACCTTCTCAG4420.23783900129143348No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA4400.23676280671545416No Hit
CATAGATTTGGCACTCACATACACGCATGGATGATCTAGCTTCGGAATGT4400.23676280671545416No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4310.23191993112354714No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG4250.22869134739560912No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT4250.22869134739560912No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4140.22277227722772275No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4120.22169608265174343No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA4120.22169608265174343No Hit
CATAGAGCATCCTCGTAATAGCAAACATTGTCCTTGCACACCATGGATCT3970.2136246233318984No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3930.2114722341799397No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3880.2087817477399914No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTCACTCAAATATAGACCT3680.19801980198019803No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3590.19317692638829098No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGACCCCCAAGTATATGACACATT3570.19210073181231166No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG3550.1910245372363323No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTACGGTAGGATGACTTATGGAATC3470.18671975893241496No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3360.18080068876452862No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTAAATGTTAGCTGTCTCAGAG3350.18026259147653895No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCAAGTCCCAAGTATATGACAC3100.16681015927679724No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG3040.16358157554885924No Hit
CATAGAATTCCCCAATGTCCTGTGCAGTTCTACACCCGTAATCCCTCCCT3000.16142918639690057No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2890.1555101162290142No Hit
CATAGAATTCCCCAATGTCCTGTACAAACCAAACAATAGCCAGTCTATGA2880.15497201894102453No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGGAACAAGGGCATGGTCA2840.15281962978906585No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTCTCTTCCGCCTTTATCCTTCTAT2810.15120533792509686No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC2740.14743865690916919No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG2720.14636246233318984No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2660.14313387860525184No Hit
CATAGATGCACCAGAAGCCACCTACCTTCTCAGCCCAAGTATATGACACA2640.1420576840292725No Hit
CATAGAATTCCCCAATGTCCTGTGCACCCGTAATCCCTCCCTTTTCTATG2440.13129573826947913No Hit
CATAGACAGTATGGGGGAAACGGCTCACTTGATCATCCATTGTCTGCTCT2430.13075764098148945No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGATGGTGAAAAGTAGGGGA2410.1296814464055101No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTTCTCTGATACCATCCCTCTATG2340.12591476538958243No Hit
CATAGACCCCCATGCAACCACATCTATCCCCTTTACCTACCTTCTCAGCT2340.12591476538958243No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2280.12268618166164443No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTACCGTACAAGGTGGTGAAAAGT2230.11999569522169608No Hit
CATAGATCATGGGACTTCAGCATGGCCTCATAGAGAAGGAAAATGTCAGT2210.11891950064571674No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGGGCAAGTGTATGGTCAGTTC2160.11622901420576841No Hit
CATAGACAGAACACCACACCCCTGTCGTAGTGTAGGAAAATGTCAGTGGG2120.11407662505380974No Hit
CATAGATTTGGCACTCACATACACGCCTCTTACCCTTTGCCAAGATTGTA2020.10869565217391304No Hit
CATAGAGGGAAGAGAAGAGGAGCTGGTGGTGCTGGAACTAGTTCTATGAG1970.10600516573396469No Hit
CATAGACCCACTTACACACACAGGTTTGACCCACTTTGTTCCCTGGCTTC1950.10492897115798536No Hit
CATAGAGCACCCAACTATCCTTCAGCATCACCCCTTCATTTTGCTGGAAC1940.1043908738699957No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1930.10385277658200602No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTCCCTCTCCCCAAAATTCTG1860.10008609556607835No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)