FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807280

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807280
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences185840
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG100535.409492036160138No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT92694.987623762376238No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT72173.883448127421438No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG68123.6655187257856223No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT53012.8524537236332326No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT51122.7507533362031857No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT50792.7329961256995263No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT48782.624838570813603No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGAAGTGCACAGTTTGGA44712.405832974601808No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT43392.334804132587172No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG31651.7030779164873011No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT31391.6890873869995695No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT27781.4948342660352993No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT27141.4603960396039606No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT22801.2268618166164442No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC22221.1956521739130435No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT20631.1100947051226862No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT20511.1036375376668102No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT19771.0638183383555746No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG18550.9981704692208351No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT17540.9438226431338786No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC16730.9002367628067155No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG16020.8620318553594489No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG15030.8087602238484717No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT14330.771093413689195No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC14330.771093413689195No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT14220.7651743435213086No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT14160.7619457597933706No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT12930.6957597933706414No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG12910.694683598794662No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG11990.6451786482996126No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC10850.5838355574687903No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT10800.581145071028842No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT10750.5784545845888936No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC10390.5590830822212656No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT10290.553702109341369No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT10040.5402496771416272No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT9850.5300258286698235No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC9850.5300258286698235No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA9790.5267972449418855No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG9650.5192638829100302No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC8780.47244941885492897No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCATAGATGTGGTTGCATGGGGGT8380.45092552733534225No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATAGATCTGCTCACGATGGTATT8350.4493112354713732No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA8260.4444683598794662No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG8020.43155402496771417No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT7980.4294016358157555No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT7880.42402066293585877No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGCATTCTTTCTCCAGA7620.4100301334481274No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT7460.4014205768402927No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGGTAGCATTCTTTCTCCAGA7450.40088247955230305No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA6900.3712871287128713No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT6800.3659061558329746No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT6770.3642918639690056No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT6550.3524537236332329No Hit
CATAGAAAAGTGTATTATGGGCCCAGAGTGGGAGTCATTCATGATCTATG6050.32554885923374943No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC5780.3110202324580284No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAAGTGCACAGTTTGGA5560.2991820921222557No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5460.293801119242359No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT5390.2900344382264314No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGACACTTGAAAGCTCCCTGG5330.28680585449849333No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT5240.28196297890658634No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG5140.2765820060266896No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATTGCCAAGTAAGTCTACAAAGA5070.27281532501076194No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCAATGTCTGGCACAATGAGG4850.2609771846749892No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTCTGCTCACGATGGT4790.25774860094705127No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT4770.25667240637107186No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT4720.25398191993112357No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC4610.2480628497632372No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4610.2480628497632372No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT4370.23514851485148514No Hit
CATAGATGAAAACATTCCGAAGCTAGATCATCCATGCGTGTATGTGAGTG4370.23514851485148514No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4280.23030563925957814No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTACGGTAGGTGGCTTCTGGTGC4250.22869134739560912No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT4200.2260008609556608No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG4170.22438656909169177No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4110.22115798536375378No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4100.22061988807576408No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT4070.2190055962117951No Hit
CATAGATCCATGGTGTGCAAGGACAATGTTTGCTATTACGAGGATGCTCT3990.21470081790787776No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3820.20555316401205337No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3760.20232458028411537No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACGGTTGCAGGATGAATGG3630.19532931554024968No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGTCCAGTTAGGCTACTT3540.19048643994834266No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG3500.188334050796384No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC3500.188334050796384No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACCGTAGAACTTTCCCACCG3440.18510546706844597No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3440.18510546706844597No Hit
CATAGAAACTCTGAGACAGCTAACATTTAAATGTTTGCTATTACGAGGAT3350.18026259147653895No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3170.1705768402927249No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGAACTGCACAGGACATTGGGGA3130.16842445114076623No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGACTTGGTCTAGGATGAGA3090.16627206198880756No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG3010.16196728368489022No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTAACTTCGCCTGCCTTTCTCTAT2850.15335772707705553No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAGGACATTGGGGAATTCTATGT2840.15281962978906585No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2840.15281962978906585No Hit
CATAGACACTTGACCATGCCCTTGTTCCTCATAGACACTTGAAAGCTCCC2780.14959104606112786No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2720.14636246233318984No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2670.1436719758932415No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGCTGAGAAGGTAGGTGGCT2640.1420576840292725No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG2590.13936719758932414No Hit
CATAGAGCAGACAATGGATGATCAAGTGAGCCGTTTCCCCCATACTGTCT2490.13398622470942745No Hit
CATAGAAAAGGGAGGGATTACGGGTGCACAGGACATTGGGGAATTCTATG2480.1334481274214378No Hit
CATAGAACTGTCCCCTACTTTTCACCATCTCATAGAACTTTCCCACCGCC2330.12537666810159276No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAACTTCGCCTGCCTTTCTCTATG2310.12430047352561342No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGATAGATGTGGTTGCATGGGGGT2290.12322427894963409No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2240.12053379250968575No Hit
CATAGATGGCCCACTGACATTTTCCTTCTCTATGAGGCCATGCTGAAGTC2220.11945759793370642No Hit
CATAGAACTGACCATACACTTGCCCTAGACACTTGAAAGCTCCCTGGATC2210.11891950064571674No Hit
CATAGAACTGTCCCCTACTTTTCACCACCTTGTACGGTACAGTTAGGCTA2180.11730520878174774No Hit
CATAGATGGCCCACTGACATTTTCCTACACTACGACAGGGGTGTGGTGTT2060.11084804132587171No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGGGTAAGAGGCGTGTATGTGA2000.1076194575979337No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCCTCTTCTCTTCCCTCTATGTG1980.10654326302195437No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1970.10600516573396469No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCAAACCTGTGTGTGTAAGTGGG1960.10546706844597503No Hit
CATAGAGCAGAATTTTGGGGAGAGGGAGGTCTAGGATGAGATAATTGCCC1930.10385277658200602No Hit
CATAGACCAGGACAATCACAGGGCACTGGGGAATTCTGCACAGGACATTG1910.10277658200602668No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTGAAGGATAGTTGGGTGC1860.10008609556607835No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)