FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37231
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC414211.12513765410545No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA25016.7175203459482695No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC23056.19107732803309No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA21275.712981117885633No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT18705.02269614031318No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT17584.721871558647363No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA12143.260723590556257No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA11563.104939432193602No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG11503.0888238296043617No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG9842.6429588246353846No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA9172.4630012623888695No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC8512.285729633907228No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG6841.8371786951733768No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT6651.786145953640783No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCTGCTACAAGCAATGGGGAAAGGA5841.5685853186860412No Hit
CATAGATCATGGGACTTCAGCATGGCCATAGAGTTTAAATGACCTTCTCT5171.3886277564395262No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC5071.3617684187907926No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT4671.2543310681958584No Hit
CATAGAGCTGGCTTCCTAACTTCCAACCTTCCTAACCATGGGCATATCTA3801.0206548306518761No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG3330.8944159437028284No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC3200.8594988047594747No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTACGAGAC3120.8380113346404877No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT2810.7547473879294136No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT2650.7117724476914399No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC2490.6687975074534662No Hit
CAAAGTCACGAAAGTGGGTCTATGAGACCAAGTCTCTGCTACCGTATGCT2090.5613601568585319No Hit
CATAGACAGGGAGGCGTATAAGTGATGGGGAAAGGATTGGAGACAGCCGC1940.5210711503854315No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT1910.5130133490908114No Hit
CATAGACAGGGAGGCGTATAAGTGATGTCCTTTCCCTCACTCTCTCCATC1790.4807821439123311No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTACGAGAC1690.45392280626359754No Hit
CATAGATCATGGGACTTCAGCATGGCACGACATGGTTCTACACATAGATC1660.44586500496897746No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTACGAGACCA1650.4431790712041041No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1620.435121269909484No Hit
CATAGATGAAAGCCTGTTGAATTTATGACTGACTGATACAGGAAGGCCTT1560.41900566732024386No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAGCAGAATTACCTCTGGA1490.4002041309661304No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGATGCCCTTTTTGTGTGCTTC1430.3840885283768902No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC1430.3840885283768902No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTACGAGACCA1320.3545432569632833No Hit
CATAGAACTTCACAAGGGCTTTAGGGTACGGTAGCAGAATTACCTCTGGA1250.3357417206091698No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1210.32499798554967635No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAC1200.322312051784803No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT1190.31962611801992963No Hit
CATAGAGATGTTTGATAAGCAGGGTGTTGATTGTGTTATTGGTAAGGGTC1060.284708979076576No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1030.2766511777819559No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGGAGACAGCCGCTCAC960.2578496414278424No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTAATCTGTGAGTTGCTG960.2578496414278424No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA920.24710590636834898No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAC910.2444199726034756No Hit
CATAGATGTCCATCATGTGGAAGCTGACACTGACGACATGGTTCTACACA840.22561843624936212No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTACGA820.2202465687196154No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCCCTTCCTAACCATGGGCATATC810.217560634954742No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA780.20950283366012193No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA770.2068168998952486No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA740.1987590986006285No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTACGA670.179957562246515No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGCAATGGGGAAAGGATTCTAT630.16921382718702158No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT620.16652789342214822No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA620.16652789342214822No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTACG610.16384195965727485No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCACCTGATTGGCCA580.15578415836265477No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTAGCAGAATTACCTCTGGA560.15041229083290808No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCACCT540.14504042330316136No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA530.142354489538288No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGGTTCTA510.13698262200854128No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA500.13429668824366792No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGGAAAGGATTCTATGAAC480.1289248207139212No Hit
CATAGATCATGGGACTTCAGCATGGCGACAGCCGCTCACCTCTATGAGAC480.1289248207139212No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCTTCTGCTGGCTATTCTATG460.12355295318417449No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATGAGAC450.12086701941930113No Hit
CATAGATCATGGGACTTCAGCATGGACAAGCAATGGGGAAAGGATTCTAT450.12086701941930113No Hit
CATAGACAGAAACCACCCAGACAACCGTCTCATAGAATCCTTTCCCTCAC450.12086701941930113No Hit
CATAGATCATGGGACTTCAGCATGGCTTCCTAACCATGGGCATATCTATG440.11818108565442777No Hit
CATACTCAGGAGGCTGAGGCAGTCTATGAGACCAAGTCTCTGCTACCGTA430.11549515188955442No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTACG420.11280921812468106No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT410.1101232843598077No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTACAATGGG390.10475141683006096No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)