FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37231
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA413011.09290644892697No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA24996.712148478418523No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA23046.188391394268217No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA21155.680749912707152No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT18264.904515054658752No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT17374.665466949585023No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT12043.2338642529075234No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT11473.0807660283097418No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA10702.8739491284144933No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG9762.6214713545163977No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG8812.3663076468534285No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAGCAGGAATTAGACTCTTGACA8142.1863500846069135No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG6721.804947489994897No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT6641.7834600198759099No Hit
CATAGAATCCTTTCCCCATTGCTTGTAGCAGAACTTTGCCCCAAAAGAGG5611.506808842093954No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTAAACTCTATGGCCATGCTGA4861.3053638097284521No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACATAGAGCAGGAATTAGACTC4371.1737530552496576No Hit
CATAGATATGCCCATGGTTAGGAAGGTTGGAAGTTAGGAAGCCAGCTCTA3510.9427627514705488No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG3300.8863581424082082No Hit
CGTAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA3080.8272675995809944No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA2620.7037146463968198No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAACTCAGATGG2330.6258225672154925No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTAGAT2210.5935913620370121No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTCATC2120.569417958153152No Hit
CATAGACATGCTAACATTTCTGGGGATATAGCAGAGACTTGGTCTCATAG1990.5345008192097983No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT1930.5183852166205581No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG1830.49152587897182454No Hit
CATAGAGGTGAGCGGCTGTCTCCAATCCTTTCCCCATCACTTATACGCCT1790.4807821439123311No Hit
CATAGATGGAGAGAGTGAGGGAAAGGACATCACTTATACGCCTCCCTGTC1690.45392280626359754No Hit
CGTAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1670.4485509387338508No Hit
CGTAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA1660.44586500496897746No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGTCGTG1640.4404931374392308No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT1550.4163197335553705No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTCATAAATTCAACAGGCTTTCA1480.397518197201257No Hit
CATAGACCATCCAGAGGTAATTCTGCTCTATGAGACCAACTCAGATGGGA1370.36797292578765006No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTATGAGACCAACTCAGATGGGATC1320.3545432569632833No Hit
CGTAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA1320.3545432569632833No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGGAAGT1270.34111358813891646No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA1250.3357417206091698No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT1220.3276839193145497No Hit
CATAGACTGTCATTGCTTGCCCATTGGTCTCATAGACTGTCATTGCTTGC1200.322312051784803No Hit
CGTAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT1180.31694018425505627No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTACCCTAAAGCCCTTGTGA1150.3088823829604362No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG1020.27396524401708255No Hit
CATAGACCCTTACCAATAACACAATCAACACCCTGCTTATCAAACATCTC950.25516370766296903No Hit
CATAGACATGCTAACATTTCTGGGGATAGAGACTTGGTCTCATAGACATG940.25247777389809567No Hit
CATAGATGCATCAGCAACTCACAGATTACACTGACGCCATGCTGAAGTCC910.2444199726034756No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA910.2444199726034756No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGACGCCATGCTGAAGTCCCATG910.2444199726034756No Hit
CGTAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT910.2444199726034756No Hit
CATAGATTGCATAGCCATGCTGAAGTCCCATGATCTATGTGTAGAACCAT880.23636217130885553No Hit
CGTAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT800.21487470118986868No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTCAGC780.20950283366012193No Hit
CATAGATATGCCCATGGTTAGGAAGGGGAACTTTGCCCCAAAAGAGGTTC760.2041309661303752No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA740.1987590986006285No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA680.18264349601138835No Hit
CGTAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA670.179957562246515No Hit
CGTAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT670.179957562246515No Hit
CATAGAATCCTTTCCCCATTGCTTGGCCATGCTGAAGTCCCATGATCTAT640.17189976095189494No Hit
CGTAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG610.16384195965727485No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT610.16384195965727485No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGCCATGCTGAAGTCCCATG600.1611560258924015No Hit
CATAGAGTTCAAATGGCCAATCAGGTGACTTGGTCTCATAAATTCAACAG560.15041229083290808No Hit
CGTAGAGCAGAAAACCTTTGAATAACAGAGCAGGAATTAGACTCTTGACA530.142354489538288No Hit
CGTAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG530.142354489538288No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTAGCCATGCTGAAGTCCCA490.13161075447879456No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA480.1289248207139212No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA480.1289248207139212No Hit
CATAGACATGCTAACATTTCTGGGGATGTAGCAGAGACTTGGTCTCATAG470.12623888694904783No Hit
CATAGAGGTGAGCGGCTGTCGCCATGCTGAAGTCCCATGATCTATGTGTA460.12355295318417449No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATGCTGAAGTCCCATGATCTAT460.12355295318417449No Hit
CATAGATTGAGCTTAAATGATCTGTGCAATTTACAAATCTATGTGTAGAA450.12086701941930113No Hit
CATAGACTGTCATTGCTTGCTCATTATTATTGGATGGGATCTATGTGTAG450.12086701941930113No Hit
CATAGAATAGCCAGCAGAAGGGAGCAGGAATTAGACTCTTGACATCTATG450.12086701941930113No Hit
CATAGAATCCTTTCCCCATTGCTTGTTACGGTAGCAGAGACTTGGTTCAT440.11818108565442777No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACGGTTGTCTGGGT430.11549515188955442No Hit
CATAGATATGCCCATGGTTAGGAAGCCATGCTGAAGTCCCATGATCTATG430.11549515188955442No Hit
CGTAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG410.1101232843598077No Hit
CATAGACTGTCATTGCTTGCCCATTGTAGACTGTCATTGCTTGCTCATTA390.10475141683006096No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)