FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807286

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807286
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences175188
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT170229.716418932803617No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG88475.050003424892116No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG81164.6327374021051675No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG67903.875836244491632No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG51412.9345617279722354No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC49722.838093933374432No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA49112.8032741968627986No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG48792.7850081055780076No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT40052.286115487362148No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA38702.2090554147544355No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT35772.041806516428066No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC30871.762106993629701No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG27561.5731671119026416No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC27041.543484713564856No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT26831.5314975911592117No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT26421.5080941617005732No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT25581.4601456720779962No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA21831.2460899148343494No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG19771.128501952188506No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG17581.0034933899582164No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT16860.9623946845674362No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT15710.8967509190127179No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG15080.8607895517957851No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC13590.7757380642509761No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT12620.7203689750439527No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC12140.6929698381167659No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG11360.6484462406100874No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC11270.64330890243624No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG11000.6278968879146973No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT10550.6022101970454597No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT10290.5873689978765669No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG10230.5839441057606686No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT9230.5268625704956961No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT8570.48918875722081423No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA8360.47720163481517No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG7940.4532273900038815No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG6530.37274242528027035No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT6510.3716007945749709No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGGCCTCTCCAGTTTCTAC6440.3676050871064228No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCAACATGCTTTTAG6240.3561887800534283No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAACATGCTTTTAGTCAC6170.35219307258488025No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCACCCTGGGAGAAGAAATGTT5970.34077676553188574No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC5890.33621024271068795No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACGAATGAGGAAACAGG5750.3282188277735918No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGCCTCTCCAGTTTCTA5700.3253647510103432No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGTAAAGGCTGGGGTCTTGGGT5600.31965659748384595No Hit
CATAGATGGCAAATGGTGGGATCTCTACACTGTCATTGTGGGTTTTAACT5510.31451925930999836No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT5480.31280681325204923No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACATGCCTGGCCAACT5200.2968239833778569No Hit
CATAGACCCTCTCTTACCCTTCCACCAATTTTTGTAACACGCACAAAGGC5100.2911158298513597No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG4990.28483686097221267No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG4860.27741626138776626No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGACGAATGAGGAAACAGGC4830.27570381532981714No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCAGACCCAGGCTACACATCTAT4740.2705664771559696No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG4380.2500171244605795No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG4340.2477338630499806No Hit
CATAGATGGCAAATGGTGGGATCTCTGACATGGGTCATTGTGAGGATTAA4270.24373815558143253No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG4210.2403132634655342No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT4150.23688837134963583No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT4120.23517592529168663No Hit
CATAGACCAGTACGCCTTACCCCTTGATGATGGGAGTGTCTGCTGGTCTA3940.2249012489439916No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT3850.21976391077014407No Hit
CATAGATGGGACAGCGACAATGACAGTGGGGTCCTAAATGTCTTTGTCCT3680.21006004977509873No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAACTGGCTTGATTGCA3640.20777678836449986No Hit
CATAGATGACATGGGAAATTATGCTGCTGATGATGGGAGTGTCTGCTGGT3550.20263945019065233No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAACAAAACTCGTGACTT3450.19693129666415507No Hit
CATAGACCAGTACGCCTTACCCCTTGTACGGTGTCAGACCCAGGCTACAC3380.192935589195607No Hit
CATAGACCCCATGACTCAGCTCCTCAATAGATGCCTGGCCAACTGTTTTT3370.19236477384295728No Hit
CATAGAAGTATTCACACTGGGGCCCACGAATGAGGAAACAGGCACTCTAT3320.18951069707970866No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC3320.18951069707970866No Hit
CATAGAACACGAAGATTTCAGATTAGCCTATGCCTGGCCAACTGTTTTTT3290.18779825102175948No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG3280.18722743566910977No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGACCATGGAGAGAATA3230.18437335890586112No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT3230.18437335890586112No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC3200.18266091284791197No Hit
CATAGATGGGACAGCGACAATGACAGTGTTGGTGCTGGAATAGTTGGACT3070.17524031326346554No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGTGCTCGTATCTTG3040.17352786720551636No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT3030.17295705185286664No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGGTCCTAAATGTCTT3000.17124460579491746No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTAAAGGCTGGGGTCTTG2980.170102975089618No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA2890.16496563691577049No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTAGCCCGTTCTCTCTGT2870.16382400621047102No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGCATTAGGAAGTCTT2870.16382400621047102No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAACAACAACAAAACTCG2860.1632531908578213No Hit
CATAGAGGCTGCAGTGAACAATGATCGACACTGACGAATGAGGAAACAGG2820.1609699294472224No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC2690.15354932986277597No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGACGACATGGGTCATTGTGAGGA2640.15069525309952736No Hit
CATAGATGGTATTTGAGTGGGGAAACAGAACGAATGAGGAAACAGGCACT2630.15012443774687764No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG2560.14612873027832957No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTTGTATGCTTTATTCTCACGTG2510.14327465351508095No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG2510.14327465351508095No Hit
CATAGAACATTGATTCCTGGCATGTCCCATTGTAGATTTCTTTCACCTCC2500.1427038381624312No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA2480.14156220745713177No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCGTGCATAAAAACTGTCGGAG2430.13870813069388313No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2420.1381373153412334No Hit
CATAGAAGGAAGTAGGGCATGACAAAAGAGACAGTTGTGGAAAGTGCAAT2380.13585405393063452No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC2260.12900426969883783No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG2260.12900426969883783No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT2250.1284334543461881No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTAGGGTCCTAAATGTCTT2160.12329611617234058No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAACACTGTCATTGTGGGTT2150.12272530081969084No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA2120.12101285476174167No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATATGGTGGGTTGAGGG2100.11987122405644221No Hit
CATAGACCCCATGACTCAGCTCCTCAGTGTAGACCATGGAGAGAATAATC2090.1193004087037925No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGCTGGAATAGTTGG2010.11473388588259469No Hit
CATAGACCCTCTCTTACCCTTCCACCTCTCCAGTTTCTACGTGATCTATG1980.11302143982464552No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTTACAAAAATTGGG1970.1124506244719958No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCACG1940.11073817841404662No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG1930.1101673630613969No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT1900.10845491700344771No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1820.10388839418224993No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1820.10388839418224993No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1800.10274676347695047No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGGGTCATTGTGAGG1790.10217594812430075No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTCCCATTGT1760.10046350206635159No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)