FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152933
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC83945.488678048557212No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA62494.086103064740769No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA62344.076294848070724No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC55353.6192319512466242No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA42892.8044960865215485No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT40262.6325253542400917No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA39132.558636788659086No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA32612.1323063040677943No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG32272.1100743462823592No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA30732.009376655136563No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG28051.8341365172984248No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT21831.4274224660472232No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA21771.4234991793792053No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC17361.1351376092798806No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA17291.1305604415005264No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA16031.048171421472148No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC15471.011554079237313No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG14100.9219723669842349No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT11610.7591559702614871No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT11020.7205769846926432No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA10840.7088071246885892No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA10810.7068454813545801No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG10510.68722904801449No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9910.6479961813343098No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG9400.6146482446561566No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT9090.5943779302047302No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT8990.5878391190913668No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC8810.5760692590873128No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC8510.5564528257472227No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG8350.5459907279658412No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG7970.5211432457350604No Hit
CATAGACCCCCATGCAACCACATCTATGTGTAAACAGCCTTCTCTGATAC7890.5159121968443697No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA7810.510681147953679No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAGGATGACTTATGGAATCTGAA7250.47406380571884416No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT7120.4655633512714718No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGATGACTTATGGAATCTGA7010.45837065904677216No Hit
CATAGATTGCCTCATTGTGCCAGACAATGGGCACACTTAACACCTCTATG6900.4511779668220724No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG6840.4472546801540544No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC6590.43090765237064593No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT6510.42567660347995523No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT6410.41913779236659193No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA6330.41390674347590123No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6270.4099834568078832No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA6200.4054062890285288No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT6020.39363642902447477No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5830.38121268790908436No Hit
CATAGAACTTGTGCTTTTGGTGTCACAATGGGCACACTTAACACCTCTAT5800.37925104457507536No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT5720.3740199956843847No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5700.372712233461712No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG5690.37205835235037565No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG5660.37009670901636665No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC5640.368788946793694No Hit
CATAGACCATGTAATACCATCGTGAGCAGGATGACTTATGGAATCTGAAG5590.3655195412370123No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG5550.36290401679166695No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC5520.36094237345765795No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA5310.3472108701195949No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC5280.34524922678558584No Hit
CATAGATTTGGCACTCACATACACGCTCTGGGAGGAACAGGGAGATGTTC5220.34132594011756784No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT5220.34132594011756784No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT5030.32890219900217743No Hit
CATAGATCTGGGAGGTGAAGAGGACAGCTACTCCAGTCTCGGCAACAAGT4960.3243250312228231No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACACTGACGACAATGGGCACA4930.3223633878888141No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT4920.3217095067774777No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG4850.3171323389981234No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGAAAATGTCAGTGGGC4690.30667024121674197No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4450.29097709454466986No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4380.2863999267653155No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT4380.2863999267653155No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT4380.2863999267653155No Hit
CATAGAATTCCCCAATGTCCTGTGCATCGGCCGCACTGAAATTGTCTATG4320.2824766400972975No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG4320.2824766400972975No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT4280.27986111565195215No Hit
CATAGAGACCCCCAAGTAGCCTAACTGAGGTTCTTCAACACAGCTATTCT4110.26874513675923445No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA4040.26416796897988004No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT4030.26351408786854374No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAAGGATGACTTATGGA3950.25828303897785304No Hit
CATAGACCCACTTACACACACAGGTTTTGGGGGAAGAGAAACAGAATCTA3930.25697527675518034No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT3900.25501363342117134No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGGAAAATGTCAGTGGGCCAT3900.25501363342117134No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGACCAAGTATATGACACATTAC3890.254359752309835No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT3830.250436465641817No Hit
CATAGAGCAGTGCAGCAGAAGATAGCTCTCTTCCGCCTTTATCCTTCTAT3790.24782094119647166No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCATAGAACAAGGGCATGGTCAAGT3750.2452054167511263No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA3730.24389765452845366No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA3640.2380127245264266No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT3600.23539720008108125No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT3570.23343555674707225No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC3460.22624286452237255No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3430.22428122118836355No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTGTACCAAGTATATGACACA3410.22297345896569085No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCATAGAAGGGCAAGTGTATGGT3400.2223195778543545No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC3370.2203579345203455No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGTGTACAAGCACATTATTAT3350.21905017229767285No Hit
CATAGAGTCATTCCAAACTGTGCACTTACGCTGACATCCCAACCACACGT3300.21578076674099114No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGTGTACAGCCTACATCCCTC3290.2151268856296548No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT3280.2144730045183185No Hit
CATAGACCCCCATGCAACCACATCTATGACAATGGGCACACTTAACACCT3220.21054971785030044No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT3130.20466478784827344No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTTGGGGGAAGAGAAACAG3090.2020492634029281No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGAACAAGGGCATGGTCAAGTG3090.2020492634029281No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT3040.19877985784624638No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA3040.19877985784624638No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTAGGAGAACAAGGGCATGGTC3030.19812597673491006No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACATCGGCCGCACTGAAATT2980.19485657117822838No Hit
CATAGATGCACCAGAAGCCACCTACCGTACTTAGGAGTTCTGGCCCCTGT2970.19420269006689203No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT2960.1935488089555557No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG2910.19027940339887403No Hit
CATAGACAGAACACCACACCCCTGTCCATAGATGCACCCGTAATCCCTCC2880.188317760064865No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG2870.18766387895352868No Hit
CATAGACCCCCATGCAACCACATCTAAGGAATTAGAGCCAGTTCTGAGTC2860.18700999784219235No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT2820.184394473396847No Hit
CATAGATCATGAATGACTCCCACTCTGCATAGATCTGGGAGGAACAGGGA2810.18374059228551065No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2770.1811250678401653No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAGCATGAGAAGAATGGC2750.17981730561749262No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2700.17654790006081095No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTACACATAGATGTCCCCCTTCAT2690.17589401894947462No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTTGGTGAAAAGTAGGGGACAG2680.17524013783813827No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2620.17131685117012024No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTCACTCAAATATAGACCT2610.17066297005878392No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGGTGAAAAGTAGGGGACA2460.16085475338873886No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2450.1602008722774025No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2400.15693146672072084No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2380.15562370449804816No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGCTGACATCCCAACCACACGT2370.15496982338671184No Hit
CATAGAAGGGCAATTATCTCATCCTAGACACACTGACGACAAGCACATTA2300.15039265560735746No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT2290.14973877449602113No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTGTCCTTGCACACCATGG2230.1458154878280031No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAATCACTTGATCATCCATTGT2230.1458154878280031No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT2170.14189220115998508No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC2130.13927667671463975No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2080.13600727115795805No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA2010.1314301033786037No Hit
CATAGATCATGAATGACTCCCACTCTGGAACTCTTACCCTTTTGCCAAGA2000.13077622226726734No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA2000.13077622226726734No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC1990.13012234115593102No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA1980.1294684600445947No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTCAGACAGGATGACTTATGGA1970.12881457893325834No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTCCAACTCTATAGATTATGCT1880.12292964893123133No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTACCG1880.12292964893123133No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAAGCACATTATTATTGGTTGG1860.12162188670855865No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGGGCATGGTCAAGTGTCTATGA1840.12031412448588598No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTTTGCCAAGATTGTAGGAGTAGAT1800.11769860004054063No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA1750.11442919448385895No Hit
CATAGAAAAGTCACCATGCAGCCCTGTACAAACCAAACAATAGCCAGTCT1700.11115978892717725No Hit
CATAGACAGTCCTGCCGTGTACATGTACAATGGGCACACTTAACACCTCT1690.11050590781584092No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGTACAAACCAAACAATAGC1680.10985202670450457No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1670.10919814559316825No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTGGTGAAAAGTAGGGGAC1670.10919814559316825No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1620.10592874003648657No Hit
CATAGACAGTCCTGCCGTGTACATGTCGTGTACAGCCTACATCCCTCATC1610.10527485892515022No Hit
CATAGAATTGCCTACTTTGGGACCCATACAAGCACATTATTATTGGTTGG1610.10527485892515022No Hit
CATAGAAAAGTCACCATGCAGCCCTGCACATAGAAAAGTCACTCAAATAT1600.1046209778138139No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCCTCTCCCCAAAATTCTGCTCTA1550.1013515722571322No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTGACATCCCAACCACACGTCTATG1550.1013515722571322No Hit
CATAGATCTGGGAGGTGAAGAGGACATAGTCACGCGATGTGGCATCCCAG1540.10069769114579587No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)