FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32664
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT27548.431300514327699No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA24307.439382806759736No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT23807.286309086456037No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG22266.814842027920647No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA21406.551555228998287No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT17105.23512123438648No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG16254.9748959098701935No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA9973.0522899828557435No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA7402.2654910604947345No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA6652.0358804800391868No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC4431.3562331618907666No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA3981.2184668136174381No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC3811.1664217487141808No Hit
CATAGATTGGAACTTTGCCAGCCTTACCATTTTCCCCCAAGTCATCTATG3381.0347783492530003No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA3271.0011021307861867No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT3120.9551800146950772No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC2940.9000734753857457No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC2810.8602743081067843No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGATCTATCCAGGAATTTTAT2550.7806759735488611No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA2470.7561841783002694No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA2420.7408768062698996No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2010.615356355620867No Hit
CATAGATCATGGGACTTCAGCATGGCAAGCAATGGGCAAGCAATGACAGT1930.5908645603722753No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCTATGAGACCAAGTCTCTGCT1740.5326965466568699No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGACGACATGGTTCTACACATAG1640.5020818025961303No Hit
CATAGATCCCATCCAATAATAATGAGCAACACTGACTGATACAGGAAGGC1610.4928973793779084No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1500.4592211609110948No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1460.44697526328679893No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC1450.4439137888807249No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA1440.440852314474651No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1410.43166789125642907No Hit
CATAGAGCAACAGGGACTCTCATTCACACTGACGACATGGTTCTACACAT1360.41636051922605927No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1270.38880724957139357No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGATGCCCTTTTTGTGTGCTTC1260.3857457751653196No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT1230.3765613519470977No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTGTTATT1220.37349987754102376No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA1210.3704384031349498No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1200.36737692872887584No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA1050.3214548126377663No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA1000.3061474406073965No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA960.2939015429831006No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA940.28777859417095275No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCCAATGGGCA920.28165564535880483No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTGTACCATGTTTTCATCCTGCTT890.27247122214058295No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCATGTTTTCATCCTGCTCCAT880.26940974773450893No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC860.263286798922361No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACGACATGGTTCTACACAT780.2387950036737693No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAC750.2296105804555474No Hit
CATAGAAAACAGAGTCACAGTCCCCAGATCCCCAGAAATGTTAGCATGTC700.21430320842517758No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCTTCTGCTGGCTATTCTATG660.2020573108008817No Hit
CATAGATATCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG600.18368846436443792No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTG600.18368846436443792No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA590.18062698995836396No Hit
CATAGAACTTCACAAGGGCTTTAGAGGCTACACATGGCTATGCAATCTAT580.17756551555228997No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT570.174504041146216No Hit
CATAGATGTCCATCATGTGGAAGCTGCACAGATCATTTAAGCTCAATCTA570.174504041146216No Hit
CATAGAGCCAAGGAAAGTTGAATGGACAAGCAATGGGGAAAGGATTCTAT530.16225814352192014No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC510.15613519470977222No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCTTGTGCTGGCTTGACTTTT510.15613519470977222No Hit
CATAGATCCCATCCAATAATAATGCGCAAGCAATGGGGAAAGGATTCTAT510.15613519470977222No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT500.15307372030369826No Hit
CATAGATCCCATCCAATAATAATGCACAAGCAATGGGGAAAGGATTCTAT490.1500122458976243No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATGAGAC480.1469507714915503No Hit
CATAGACAGGGAGGCGTATAAGTGATGACATGGTTCTACACATACTCAGG480.1469507714915503No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC460.14082782267940241No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCACCT450.13776634827332845No Hit
CATAGACCTGGGCTTAGGGGCTACCCATGGCTATGCAATCTATGAGACCA440.13470487386725447No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA430.1316433994611805No Hit
CATAGACCTGGGCTTAGGGGCTATCCATGGCTATGCAATCTATGAGACCA430.1316433994611805No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGGGCA420.12858192505510654No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA400.12245897624295861No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCTATGAGACCAAGTTGTACCA380.11633602743081069No Hit
CATAGATCCCATCCAATAATAATGCGCAAGCAATGGGCAAGCAATGACAG370.11327455302473671No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG350.10715160421258879No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAACAATGGGCAAGCAATGACAGT330.10102865540044086No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)