FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32664
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT28408.69458731325006No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA24787.586333578251287No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA23897.313862356110704No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT23877.3077394072985555No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA23057.05669850600049No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT17985.504530982120989No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG16955.189199118295371No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG13104.010531471956894No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT7462.283859906931178No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAAGTTCCAATCTATGTGTAGAA6411.9624050942934117No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATCACTTATACGCCTCCCTGTCTA4161.2735733529267694No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA3911.1970364927749204No Hit
CATAGATGACTTGGGGGAAAATGGTAAGGCTGGCAAAGTTCCAATCTATG3511.0745775165319618No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT3351.0255939260347784No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT3301.0102865540044086No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC3200.9796718099436689No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCATGCAAGACTAGGCAATT2540.7776144991427871No Hit
CATAGACATGCTAACATTTCTGGGGATATTACTGGGGACTGTGACTCTGT2420.7408768062698996No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG2070.6337252020573109No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCCATGCTGAAGTCCCATGAT1960.6000489835904972No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGCTCATTATTATTGGATG1660.5082047514082783No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT1550.4745285329414646No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTGGAAGTTAGGAAGCCAGC1490.4561596865050208No Hit
CATAGACTGTCATTGCTTGCCCATTGTAGCAGAGACTTGGTCTCATAGAC1460.44697526328679893No Hit
CATAGACTGTCATTGCTTGCCCATTGGTCTCATAGACTGTCATTGCTTGC1450.4439137888807249No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTGGGGACTGTGACTCTG1440.440852314474651No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA1410.43166789125642907No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT1410.43166789125642907No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA1310.4010531471956894No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA1280.3918687239774675No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT1250.38268430075924564No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACTTGGTCTCATAGAGCAGGAA1240.3796228263531717No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG1210.3704384031349498No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA1210.3704384031349498No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGGAAGT1190.3643154543228019No Hit
CATAGATATGCCCATGGTTAGGAAGGCTGGCAAAGTTCCAATCTATGTGT1060.3245162870438403No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT1060.3245162870438403No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG1030.3153318638256184No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGATGGGATCTATGTGTAG1010.3092089150134705No Hit
CATAGAAGCAGGATGAAAACATGGTACAGGATGAAAACATGGAGCAGGAT960.2939015429831006No Hit
CATAGACTGTCATTGCTTGCCCATTGGACTGTCATTGCTTGCTCATTATT940.28777859417095275No Hit
CATAGACTGTCATTGCTTGCCCATTGAGACTTGGTCTCATAGACTGTCAT910.27859417095273087No Hit
CATAGAAGCAGGATGAAAACATGGTACAGCAGGAATTAGACTCTTGACAT880.26940974773450893No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTACTGGGGACTGTGACTCTG860.263286798922361No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA750.2296105804555474No Hit
CATAGACATGCTAACATTTCTGGGGATACTTGGTCTCATAGACATGCTAA690.2112417340191036No Hit
CATAGACATGCTAACATTTCTGGGGATCTGGGGACTGTGACTCTGTTTTC690.2112417340191036No Hit
CATAGAATAGCCAGCAGAAGGGAGCAGGAATTAGACTCTTGACATCTATG680.20818025961302963No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT640.19593436198873376No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT620.18981141317658584No Hit
CATAGAGCAGAAAACCTTTGAATAACAGCAGAGACTTGGTCTCATAGAGC620.18981141317658584No Hit
CATAGATTGAGCTTAAATGATCTGTGCAGCTTCCACATGATGGACATCTA620.18981141317658584No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG580.17756551555228997No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA570.174504041146216No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATTCAACTTTCCTTGGCTCTAT540.16531961792799413No Hit
CATAGATGAAAAGTCAAGCCAGCACAAGGGAGCAGGAATTAGACTCTTGA540.16531961792799413No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT510.15613519470977222No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCATCACTTA500.15307372030369826No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA430.1316433994611805No Hit
CATAGACATGCTAACATTTCTGGGGACTGTGACTCTGTTTTCTATGTGTA420.12858192505510654No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCACTTATACGCCTCCCTGT420.12858192505510654No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA380.11633602743081069No Hit
CATAGAAGCAGGATGAAAACATGGTACAACTTGGTCTCATAGGAGCAGGA380.11633602743081069No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG380.11633602743081069No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCCCATTGCTTGCCCATTGCT380.11633602743081069No Hit
CATAGACATGCTAACATTTCTGGGGATCATTACTGGGGACTGTGACTCTG330.10102865540044086No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGAAGTTAGGAAGCCAGCT330.10102865540044086No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)