FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152220
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3650023.978452240178687No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA107337.050978846406516No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC72424.757587702010248No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC59433.9042175798186833No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA44782.9417947707265797No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC42842.814347654710288No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG40162.638286690316647No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG36072.3695966364472474No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA34632.274996715280515No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG29681.9498094862698725No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT28751.8887137038496913No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA28601.8788595453948231No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT26291.727105505189857No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT22901.504401524109841No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC22021.4465904611746156No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA16191.0635921692287478No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTTACAACCAATGCTCTT15251.0018394429115753No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT14880.9775325187229011No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTCAGACATGTTTCCT12110.7955590592563394No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT10920.717382735514387No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGTGCTCATACAGAATTAGAT9760.6411772434634083No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC8020.5268690053869399No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT7870.517014846932072No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG7350.4828537642885298No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC7160.470371830245697No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAACTTCAGTTGAC6860.4506635133359611No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT6740.44278018657206675No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTACTTCA6430.4224149257653396No Hit
CATAGATCTGTGGCTCCCGATAAATGTATAGAGAATTAGCGGAGAGTGAG5430.35672053606621995No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACTTCAGTTGACTATA5150.33832610695046644No Hit
CATAGAACAAGGCCAGAATTACCCTGTGTATATTCTCCTGCATTCACTTC5010.32912889239258963No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG5000.32847194849559846No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT4630.30416502430692416No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT4590.30153724871895937No Hit
CATAGACCACACCCAAACACCACGTAAGACTTGTGCTCATACAGAATTAG4570.300223360924977No Hit
CATAGACTTGATGCCCAGGAAACCTCTCGGCAGTGAGGTACAGAAATCTA4570.300223360924977No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG4500.29562475364603863No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG4330.2844567073971883No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC4170.2739456050453291No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG4120.27066088556037315No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC4120.27066088556037315No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT4100.26934699776639076No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATTTTAACGGAC3780.24832479306267247No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTCAGACATGTTTCCTAGTTT3610.23715674681382212No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA3570.23452897122585734No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC3480.22861647615293654No Hit
CATAGAGGGTGTTTTTCGGTGTCACATGGTGGGTGCCTGATTGTTCTATG3480.22861647615293654No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC3450.22664564446196295No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTATTTAAAGACTTGAGA3420.22467481277098936No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3280.21547759821311258No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT3160.20759427144921824No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC3090.20299566417027984No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA2950.1937984496124031No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGGGACATGGATGAA2930.19248456181842072No Hit
CATAGACCCTTAGAGTTTCAGCCTCCACACTGGGACATGGATGAAGCTGG2920.19182761792142952No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGACATGGATGAAGCTGGAT2910.19117067402443833No Hit
CATAGACAGCTCACAGACTGCATACTACACTCAGACATGTTTCCTAGTTT2900.19051373012744713No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA2870.18854289843647354No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGGACATGGATGAAGCTGG2700.17737485218762317No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCAAGAGTGGGCAACAGAACAAC2680.1760609643936408No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTCTACACATGGTGGGTGCCTGATT2610.1714623571147024No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGGGACATGGATGAAGCTGGATCTA2520.16554986204178163No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2310.1517540402049665No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT2300.1510970963079753No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT2290.1504401524109841No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATTGGGCAACAGAACAAC2270.1491262646170017No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2080.13664433057416897No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCTAGGAGGTGGAGTTTGC2030.13335961108921296No Hit
CATAGAGAAGAGAAGGCGACAATGGCACACTGACGACATGGTGGGTGCCT2000.1313887793982394No Hit
CATAGACAGGAGGAGGAAGAAGAGGAACACTGACGACATGGTGGGTGCCT1950.1281040599132834No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA1850.12153462094337142No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG1830.12022073314938904No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA1800.11824990145841545No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1760.11562212587045066No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGTCTCTGCTAC1690.1110235185915123No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT1680.1103665746945211No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT1670.1097096307975299No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTCAGTGTGCCGCTAAGC1660.10905268690053871No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTACCGTAGAGAGAGGTCTT1610.1057679674155827No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTCATAGACTCTTCACTATGTCA1590.10445407962160032No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA1590.10445407962160032No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT1580.10379713572460912No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG1530.10051241623965314No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)