FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152220
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3607823.701221915648404No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT109577.198134279332545No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG84175.529496780974904No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG61594.046117461568782No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA44532.9253711733017997No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA43392.8504795690448037No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG41772.74405465773223No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG36822.418867428721587No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT35732.3472605439495466No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG30752.0201024832479306No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT29371.9294442254631454No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT28381.864406779661017No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT26371.7323610563657863No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT22671.4892918144790435No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA21501.4124293785310735No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT16391.0767310471685718No Hit
CATAGATGAAAGAGCATTGGTTGTAACACTATGGCTTAATGTTTCTCTTT15531.020233872027329No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG13970.917750624096702No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGTGCCATACCAAGAAT12380.8132965444751018No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC11160.7331493890421757No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGAAGCTTTGAGATTTGTG9940.6530022336092498No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT8300.5452634345026934No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG8150.5354092760478255No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA8120.5334384443568518No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTGGTCTCATAGAGGCAAGG7020.4611746156878202No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT6870.4513204572329523No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACTTGGTCTCATAGAGAAG6540.4296413086322428No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATACATTTATCGGGAGCCAC5490.36066219944816713No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCTCATAGAGGCAAGGGTAC5280.34686637761135203No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGAATGCAGGAGAATATACA5150.33832610695046644No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC5100.33504138746551043No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG4980.32715806070161607No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG4830.31730390224674815No Hit
CATAGATTTCTGTACCTCACTGCCGAGAGGTTTCCTGGGCATCAAGTCTA4640.3048219682039154No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCTTACGTGGTGTTTG4620.303508080409933No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT4580.3008803048219682No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG4560.2995664170279858No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG4290.28182893180922347No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC4220.2772303245302851No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT4180.27460254894232033No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA4110.27000394166338193No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC4080.2680331099724083No Hit
CATAGAGCAGCGTGTGTCCGTTAAAATACGGTAGCAGAAGCTTTGAGATT3890.2555511759295756No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG3770.24766784916568124No Hit
CATAGAACAATCAGGCACCCACCATGTGACACCGAAAAACACCCTCTATG3670.24109841019576927No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC3520.23124425174090132No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT3500.22993036394691893No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG3390.22270398108001577No Hit
CATAGAGAAGCTTTGAGATTTGTGTCTGTTCTATGTGTAGAACCATGTCG3290.2161345421101038No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA3250.213506766522139No Hit
CATAGATCCAGCTTCATCCATGTCCCCAGTGTAGAAGCTTTGAGATTTGT3010.19774011299435026No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGTATGCAGTCTGTGA2960.19445539350939428No Hit
CATAGATCCAGCTTCATCCATGTCCCAGGAAAGTTGGAACCTATCAGTGT2870.18854289843647354No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTGGAGGCTGAAACTCTAAGG2840.18657206674549995No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGTATGCAGTCTGTGAGCT2790.18328734726054394No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTGGAGACCCCATATCTACCA2670.1754040204966496No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG2620.1721193010116936No Hit
CATAGATCCAGCTTCATCCATGTCCCACCAAAAGCACAAGGGAGAATCTA2610.1714623571147024No Hit
CATAGAACAATCAGGCACCCACCATGTGTAGAGGTAAACAAACTTCTGGC2580.1694915254237288No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2500.16423597424779923No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT2400.15766653527788727No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATAGAGAAGCTTTGAGATTTGTGT2330.1530679279989489No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2150.14124293785310735No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTTCCTCTTCTTCCTC2070.13598738667717777No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGCCATTGTCGCCTT1990.1307318355012482No Hit
CATAGATCCAGCTTCATCCATGTCCCGCAGAGACTTGGTCTCATAGAGAA1980.130074891604257No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGCAGTCTCACC1920.12613322822230982No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1900.12481934042832743No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT1810.11890684535540665No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG1810.11890684535540665No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG1760.11562212587045066No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1750.11496518197345947No Hit
CATAGAGATCTTCTCGGCTTAGCGGCACACTGACACTATGGCTTAATGTT1730.11365129417947707No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC1720.11299435028248588No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTATGAGAGGCAAGGGTACT1590.10445407962160032No Hit
CATAGATCTCAAACAGCCTCTCCCAGGCTAGAGTGCCATACCAAGAATAA1580.10379713572460912No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT1560.10248324793062673No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG1560.10248324793062673No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1540.10116936013664433No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)