FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807304

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807304
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences150076
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1657111.041738852314827No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT126788.447719821956875No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT126018.396412484341267No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA69154.607665449505584No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT66394.423758628961326No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA54793.65081691942749No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG53633.5735227484741063No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG30242.014979077267518No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT27161.8097497268050853No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT24311.6198459447213411No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA24011.5998560729230522No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA23381.5578773421466459No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC20621.373970521602388No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT17841.1887310429382447No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT17501.166075854900184No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA15391.0254804232522188No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCATAGACCTTTTTCTGTAGTCAA15041.0021589061542153No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT14360.9568485300780938No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA12930.8615634745062501No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT12450.829579679628988No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG12170.8109224659505851No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACGGAAGACACAGCACACT12030.8015938591113835No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT11040.7356272821770303No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG10850.722967030038114No Hit
CATAGAGTCCTTCCCTCTCACACATGTCCCCCAGGTAGCAAAACAGAGTC9850.6563341240438179No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT9190.6123564060875824No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA8640.5757083077907194No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8240.5490551453930009No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGCCCCCAGGTAGCAAAACAGAG8130.5417255257336283No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT7540.5024121111969936No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7470.49774780777739275No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC6960.4637650257203017No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT6610.44044350862229803No Hit
CATAGAGGCACGATCTTGTTTCACTGTCACTGAGCTGAGGGTCACTTCTA6590.4391108505024121No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA6180.41179135904475067No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACACTGAAGCAGAGGTAGATGGAT6090.40579439750526397No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG6070.40446173938537805No Hit
CATAGACACACTGACAATTTGCACCTGGGAAAGGTATGTGGCACATCTAT6020.4011300940856633No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT5630.37514326074788773No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG5560.370478957328287No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT5530.3684799701484581No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTACCCCAGGTAGCAAAA5200.34649111117034037No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT4970.3311655427916522No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGATAGCGAGAAGAGTGGAGGC4910.32716756843199446No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCAACAATGCCTCACACAC4880.3251685812521656No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA4700.31317465817319223No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT4530.3018470641541619No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCTAACCTCCCACCCCAGCT3920.2612009914976412No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA3880.25853567525786936No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA3770.2512060555984968No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCAGCTTAC3400.22655188038060714No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3120.20789466670220422No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG3100.2065620085823183No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGATAGCGAGAAGAGTGGAG2990.19923238892294573No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2870.19123644020363015No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2800.18657213678402942No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2660.17724352994482795No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC2580.17191289746528424No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACCGTAGAGGAGAATGA2440.1625842906260828No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT2290.15258935472693835No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT2250.1499240384871665No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGGAGAATGATATTGTTGCAGAT2190.14592606412750872No Hit
CATAGAAGTACCATCAGAGTGAACAGGCGAGGCACAGGGATAGCGAGAAG1970.13126682480876356No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1870.12460353420933393No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT1790.11927290172979024No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1730.11527492737013247No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA1720.1146085983101895No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1680.11194328207041765No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGCAACATATCAGAAGC1660.11061062395053171No Hit
CATAGACGAATTGCCCATGTCAGTAAATCATGTCGTCAGTGTAGGAATCT1600.10661264959087395No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1600.10661264959087395No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1530.10194834617127321No Hit
CATAGATGGGATTATAGGTGTGAGCCACAGCGCCTGGCCAAAAATTTCCA1510.10061568805138729No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)