FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807310

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807310
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92825
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2343825.24966334500404No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT44514.795044438459467No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT29773.207110153514678No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA24982.6910853757069755No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG24682.658766496094802No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA21192.2827901966065176No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA20772.237543765149475No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA13241.4263398868839214No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT13201.4220307029356316No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA12401.3358470239698357No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG11621.2518179369781848No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT11011.1861028817667656No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA10131.09130083490439No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA9411.0137355238351737No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8280.8920010772959871No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG8070.8693778615674657No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT7790.8392135739294371No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA7410.798276326420684No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7370.7939671424723942No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA7350.7918125504982493No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA6260.6743872879073526No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6160.663614328036628No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC5470.5892809049286292No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC5440.5860490169674117No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGTTTACTCGGAGATTTGAC5380.5795852410449771No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4700.5063291139240507No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA4560.4912469701050364No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG4390.4729329383248047No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA4290.46215997845408024No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC4210.45354161055750064No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT4200.4524643145704282No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC4020.43307298680312417No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3870.4169135469970374No Hit
CATAGATCCCATACTCCTCCATTACCCTAACCTCCCACCCCAGCTGTCTA3810.41044977107460273No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT3470.3738217075141395No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT3350.36089415566927013No Hit
CATAGACCATCCCTTCTACAAGAGGCAGATAGCGAGAAGAGTGGAGGCTC3230.34796660382440076No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT3180.34258012388903847No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3100.3339617559924589No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2820.3037974683544304No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT2790.300565580393213No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2780.29948828440614056No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACAGGGCAGAGAGTGTGTT2670.28763802854834364No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT2560.2757877726905467No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGGCAT2410.25962833288446No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACGGTAGCTTACACTGCACATGG2380.25639644492324265No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGATAGCGAGAAGAGTGGAG2350.25316455696202533No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2330.2510099649878804No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATACGATAGCGAGAAGAGTGGAG2280.2456234850525182No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2280.2456234850525182No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT2260.2434688930783733No Hit
CATAGACACACTGACAATTTGCACCTGTACGGAAGACACAGCACACTCTT2200.23700511715593858No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG2180.2348505251817937No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGAAGCAGAGGTAGATGGAT2110.22730945327228658No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2100.2262321572852141No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGCAGGGCAGAGAGTGTGTT2080.22407756531106923No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT2030.21869108537570697No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA2020.21761378938863454No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATGCAGGGCAGAGAGTG2020.21761378938863454No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGAAAGGTATGTGGCACA1980.21330460544034474No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1940.20899542149205494No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACAGAAGTGTAT1940.20899542149205494No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGACCTTTTTCTGTAGTCA1900.20468623754376514No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC1820.19606786964718553No Hit
CATAGATATTCTGCCCCCTCCTCTCCGATAGCGAGAAGAGTGGAGGCTCT1810.19499057366011313No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1780.19175868569889576No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACCCCAGGTAGCAAAACAG1780.19175868569889576No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1750.18852679773767841No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1710.1842176137893886No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA1670.17990842984109884No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1660.17883113385402638No Hit
CATAGACACACTGACAATTTGCACCTGGGAAAGGTATGTGGCACATCTAT1640.17667654187988152No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1620.1745219499057366No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1590.17129006194451923No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGCCCCCAGGTAGCAAAACAGAG1540.165903582009157No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAGTTTCTAGCTT1520.16374899003501212No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1500.16159439806086723No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1500.16159439806086723No Hit
CATAGACCCCCTTGAGTTCACTGGACATGGGGTCTATGTGTAGAACCATG1500.16159439806086723No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGAATACTGGCTTCCA1470.15836251009964988No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGAAGACACAGCACACT1460.15728521411257743No Hit
CATAGAAACAGCAAAGCCCTCCACCAGACTCTATGTGTAGAACCATGTCG1460.15728521411257743No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCTAGCCAAATTCCTTACCGATCT1460.15728521411257743No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT1450.156207918125505No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1430.15405332615136008No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1390.14974414220307028No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1390.14974414220307028No Hit
CATAGATATTCTGCCCCCTCCTCTCCTGTGTCTTCAGCTCTTTGAGGCAT1370.1475895502289254No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAAGATAATGGCCTCCT1340.14435766226770805No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1340.14435766226770805No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGAGGAGAATGATAT1340.14435766226770805No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA1280.13789388634527336No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGTGGGAAAGGTATG1270.1368165903582009No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGATAGCGAGAAGAGTGGAG1270.1368165903582009No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1200.12927551844869378No Hit
CATAGAGGCACGATCTTGTTTCACTGTAGCAGAGACTTGGTCTCATAGAG1190.12819822246162133No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1190.12819822246162133No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG1180.1271209264745489No Hit
CATAGAGGTGAGCGGCTGTCTCCATAAGTCCGCGCAGAGCCTTCAGGTCA1160.124966334500404No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA1160.124966334500404No Hit
CATAGACACAGGCCAATCTCAGCAGAAGCATCTATGTGTAGAACCATGTC1150.12388903851333152No Hit
CATAGACCATCCCTTCTACAAGAGGCAACATATCAGAAGCATCTATGTGT1150.12388903851333152No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1120.12065715055211419No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACTGTATATCTAGGAGTAGAA1100.11850255857796929No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTAGATGGATCATCTATGAAG1080.11634796660382439No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGTTTCACTGAGCTGAG1080.11634796660382439No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGTCCATCCAGTCCAGCTCC1060.11419337462967952No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT1040.11203878265553462No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1030.11096148666846214No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTGTCCATCCAGTCCAGCTC1020.10988419068138972No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA990.10665230272017237No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG990.10665230272017237No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA970.10449771074602747No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA970.10449771074602747No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA960.10342041475895503No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA960.10342041475895503No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCGCATTCT940.10126582278481014No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAGGAGCTGACTTACTG940.10126582278481014No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG940.10126582278481014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)