FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807311

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807311
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112855
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1376712.198839218466173No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG74326.585441495724602No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG65035.762261308759027No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC62235.514155332063267No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA46104.084887687740906No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA41703.695006867218998No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG41303.659563156262461No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA29712.632581631296797No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG27512.4376412210358427No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT27202.4101723450445265No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT22882.027380266713925No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA22381.9830756280182535No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT21881.938770989322582No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG20901.851933897479066No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC20041.775729918922511No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA15951.4133179743919189No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA12691.1244517300961412No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC11971.0606530503743743No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT11781.0438172876700191No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT9710.8603960834699393No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA9540.8453325063134111No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA8550.7576093216959815No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA7800.6911523636524745No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG7680.6805192503655133No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG7640.6769748792698596No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG7450.6601391165655044No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC6080.5387444065393647No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC5940.5263391077045767No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA5520.4891232112002127No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5420.48026228346107835No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA5220.4625404279828098No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT5210.46165433520889637No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT5160.45722387133932924No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGGCTCAGGTATGTCTTTATT5060.4483629436001949No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT4730.4191218820610518No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT4600.40760267600017724No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC4520.4005139338088698No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4420.39165300606973547No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT3850.34114571795667004No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3550.3145629347392672No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGCCCTCTCTGCTGTT3540.3136768419653538No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3530.31279074919144034No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGACATGGTTCTACACAT2740.2427894200522795No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGGCTCAGGTATGTCTTT2700.23924504895662577No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2560.22683975012183777No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2510.2224092862522706No Hit
CATAGATCATGGGACTTCAGCATGGCACCTGACGACTGGTCTACCAGTTA2500.2215231934783572No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGACATGGGTCTACCAGT2500.2215231934783572No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2400.21266226573922292No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT2390.21177617296530946No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGACGACATGGGTCTA2320.20557352354791547No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGATCATTGTTCACTG2280.20202915245226177No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGATCATTGTTCACTGC2150.19050994639138719No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCATCAGGAACCATGGG2060.18253511142616632No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA1840.1630410704000709No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA1830.16215497762615746No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAGGGGTAAGGCGTACTGGTCTA1830.16215497762615746No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1800.15949669930441718No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA1750.15506623543485004No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1690.14974967879136947No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1640.14531921492180233No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1600.1417748438261486No Hit
CATAGAGAAGACTCCCTCAACCCACCATGATGCTGAAGTGATGGGCTAGA1550.13734437995658147No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA1510.13380000886092774No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1480.13114173053918746No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC1440.12759735944353373No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1380.12228080280005317No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGTCTACCAGTTATTAGTTGAATG1380.12228080280005317No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCGTCCCAACTGTCTCTGAA1380.12228080280005317No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTTTTTGTGCACCTTCATTGTTGC1370.12139471002613975No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1350.11962252447831288No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGGCTCAGGTATG1330.11785033893048603No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1330.11785033893048603No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1300.11519206060874575No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTATGTTCTTCCTTTTCTGC1290.11430596783483231No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT1280.11341987506091888No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACTTGCATGACAGAGCGAGA1260.11164768951309202No Hit
CATAGAGAAGACTCCCTCAACCCACCTGGTCTCAAACTGCTGGGGTTGCT1240.10987550396526517No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG1230.10898941119135173No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG1190.10544504009569802No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGACATGGTTCTACACATA1190.10544504009569802No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1170.10367285454787117No Hit
CATAGAAAGGTGCAATCAAGCCAGTTGGCTCAGGTATGTCTTTATTAGCT1160.10278676177395774No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG1150.10190066900004431No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)