FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55206
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT39307.118791435713509No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT24404.41980944100279No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG23184.19881896895265No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA22854.1390428576603995No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA19473.5267905662428No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT17863.235155599029091No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA16683.021410716226497No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA14092.5522588124479224No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA13972.5305220447052856No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG13422.4308951925515343No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT12602.2823606129768503No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT10621.9237039452233453No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC9541.728073035539615No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA9421.7063362677969787No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA7391.3386226134840415No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT7141.2933376806868817No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6671.2082020070282216No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG6131.1103865521863565No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA5921.0723472086367423No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5671.0270622758395827No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5500.996268521537514No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG4680.8477339419628301No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT4450.8060718037894432No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA4170.7553526790566243No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCCCCCAGGTAGCAAAACAGAGT4050.7336159113139876No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT3470.6285548672245771No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGACCTTTTTCTGTAGTCAAGT3440.6231206752889179No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG3140.5687787559323262No Hit
CATAGACCACACACACAACTGAGAGTTACGGAAGACACAGCACACTCTTC3020.5470419881896895No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC2970.5379850016302576No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT2810.5090026446400753No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2710.49088867152121146No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG2700.48907727420932506No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT2680.48545447958555227No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT2550.4619063145310292No Hit
CATAGACCATCCCTTCTACAAGAGGCACTTTGGAGGAGAATGATATTGTT2490.4510379306597109No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2430.4401695467883926No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTCGAGGAGAATGATATTG2430.4401695467883926No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2420.43835814947650614No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2380.4311125602289606No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT2360.4274897656051878No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT2320.4202441763576423No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC2230.40394160055066475No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2220.40213020323877846No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGCTTACACTG2200.39850740861500555No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2180.3948846139912328No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT2140.3876390247436873No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAAGGAATCTTTGGGAGGCTATTAG2140.3876390247436873No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT2130.3858276274318009No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGAGGAGAATGATAT2110.3822048328080281No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAATCTTTG2050.3713364489367098No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT2050.3713364489367098No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1950.3532224758178459No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT1920.34778828388218674No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1870.33873129732275475No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATGTCGTCAGTGTGATA1780.3224287215157773No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTTTTCTGTTTACTCGGAGATTTG1760.3188059268920045No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTCTTCAGCTC1710.30974894033257255No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC1700.30793754302068616No Hit
CATAGATCCCATACTCCTCCATTACCCTAGGAATCTTTGGGAGGCTATTA1660.3006919537731406No Hit
CATAGAACCAACCTCTCTATCTCCGTAGAGGAGAATGATATTGTTGCAGA1650.2988805564612542No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAAACATTG1620.293446364525595No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG1540.27895518603050395No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGAGAAGTGTATTAATTATC1530.27714378871861756No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG1520.27533239140673116No Hit
CATAGAGCCCCCAGAGAAGAATGACCAAAGCTAGAAACTCCCATCTATGA1480.26808680215918557No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1470.26627540484729917No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT1430.25902981559975363No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC1410.2554070209759809No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGAAGCAGAGGTAGATGGATCATCT1400.2535956236640945No Hit
CATAGAGTGATCCTCCTTTCTCAGCCGCCCTGAGGAGAATGATATTGTTG1330.24091584248088974No Hit
CATAGACCATCCCTTCTACAAGAGGCACTGGCCTCTAGCCAAATTCCTTA1310.23729304785711697No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGCTCCTTCTCACACAA1260.22823606129768503No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTATAGAAGGAATCTTTGGGAGGCTA1180.2137448828025939No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1180.2137448828025939No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGGAAACATTGGAAAGATGGG1160.21012208817882114No Hit
CATAGACCATCCCTTCTACAAGAGGCATAGTATTGAAACTGTATATCTAG1140.20649929355504837No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGG1120.2028764989312756No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAGACTTGGTCTCATAGAGGAGA1110.20106510161938923No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGATCTACAGTT1040.18838532043618447No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTATATCTAGGAG1040.18838532043618447No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACATAGACCTTTTTCTGTAGTCAA1040.18838532043618447No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCAGGTAGCAAAACAGAGTCTATG990.1793283338767525No Hit
CATAGAGGCACGATCTTGTTTCACTGTGACTTGGTCTCATAGAGGAGAAT980.17751693656486614No Hit
CATAGAGCCCCCAGAGAAGAATGACCATAGAGCCCCCAGAGGAGAATGAT970.17570553925297974No Hit
CATAGAGCCCCCAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGA970.17570553925297974No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGCCTCTATGTGTAGAACCATGTCG960.17389414194109337No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT960.17389414194109337No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC940.17027134731732058No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG920.1666485526935478No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTTCTATGTGTA910.1648371553816614No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT910.1648371553816614No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGGAGGAGCTGACTT900.16302575806977504No Hit
CATAGAGCCCCCAGAGAAGAATGACCCAGAGGAGAATGATATTGTTGCAG890.16121436075788864No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGGGAAAAGGG880.15940296344600224No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGGAGATCTATGAGAA850.15396877151034308No Hit
CATAGAGCAGCATTTCTCTCCAAGGATCTCATAGAGCAGCATTCTCTCAG820.1485345795746839No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT750.1358547983914792No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGTTTCACTGAGCTGAG740.13404340107959278No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGGGGAAAAGGGAT700.12679781183204725No Hit
CATAGACACACTGACAATTTGCGCCTGGCCAAAAATTTCCATCTATGTGT700.12679781183204725No Hit
CATAGATACCTGTCCTCTGCCTCGAGGTCACTGACAGGTCTTAAAGCTCT690.12498641452016086No Hit
CATAGATACCTGTCCTCTGCCTCGAGAGGAGAATGATATTGTTGCAGATT690.12498641452016086No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGTAGCAGAGACCTTTTTCTG680.12317501720827445No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAGGAGCTG670.12136361989638807No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG630.11411803064884252No Hit
CATAGATACCTGTCCTCTGCCTCGAGCCAAATTCCTTACCGATCTATGTG630.11411803064884252No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG620.11230663333695613No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG620.11230663333695613No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGGAAAAGGGATAGGAGG590.10687244140129695No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA590.10687244140129695No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA590.10687244140129695No Hit
CATAGAAACAGCAAAGCCCTCCACTACCCACCTGCCTCTATGTGTAGAAC570.10324964677752418No Hit
CATAGGGCACTGAGACCACATCTATGTGTAGAACCATGTCGTCAGTGTAG570.10324964677752418No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)