FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129558
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2105016.24754936013214No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT59274.574785038361197No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA36002.778678275367017No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT33642.5965204773151793No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG29632.287006591642353No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA28702.2152240695287055No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT23761.8339276617422313No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA23051.779125951311382No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT21901.6903626175149356No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT17481.349202673705985No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG16731.291313542969172No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14711.135398817518023No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14581.125364701523642No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA12910.996464903749672No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT12540.967906265919511No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG12480.963275135460566No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT12470.9625032803840752No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT12060.9308572222479508No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA10380.80118556939749No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC10020.7733987866438198No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG9890.7633646706494389No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9860.7610491054199664No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG9460.7301749023603328No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9060.6993006993006993No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8860.6838635977708826No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG8830.68154803254141No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC7490.5781194522916377No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT6770.5225458867842975No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT6320.4878124083422097No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGGGCACTGAGACCACATCTATG5670.43764182837030524No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5640.43532626314083267No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAACAATGCCTCACACACAGGT5560.429151422528906No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT5500.42452029206996095No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5380.4152580311520709No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC5150.39750536439278167No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5120.3951897991633091No Hit
CATAGAGGCACGATCTTGTTTCACTGTCACTGAGCTGAGGGTCACTTCTA4850.37434971209805645No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT4410.34038808873245957No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT4400.33961623365596877No Hit
CATAGATCCCATACTCCTCCATTACCCTAGCACTATTCTCTGGCCCGTCT4310.3326695379675512No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC4290.33112582781456956No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA4120.31800429151422527No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGATAGCGAGAAGAGTGGAGGC4090.31568872628475275No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4030.3110575958258077No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA3990.3079701755198444No Hit
CATAGACACAGGCCAATCTCAGCAGAGGAGAATGATATTGTTGCAGATTT3830.29562049429599097No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3740.2886737986075734No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCTAGCCAAATTCCTTACCGATCT3560.2747804072307384No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA3520.271692986924775No Hit
CATAGAAACAGCAAAGCCCTCCACCACAGACCTTTTTCTGTAGTCAAGTG3480.26860556661881163No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3440.2655181463128483No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT3360.25934330570092157No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCTCATAGAAGTACCATCAGAGT3270.2523966100125041No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT3260.2516247549360132No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT3100.2392750737121598No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3070.2369595084826873No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCTGTTTACTCGGAG3060.23618765340619646No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACACTGAAGACCTTTT2980.23001281279426974No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2920.2253816823353247No Hit
CATAGACACACTGACAATTTGCACCTGGGAAAGGTATGTGGCACATCTAT2890.2230661171058522No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2860.22075055187637968No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2800.21611942141743468No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG2770.21380385618796216No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA2700.20840087065252627No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACACTGGGAAAGGTATGTGGCACA2690.20762901557603544No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA2580.19913860973463623No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT2540.19605118942867286No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTAGCACTATTCTCTGGCCC2520.1945074792756912No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC2510.19373562419920035No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT2420.18678892851078283No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT2400.18524521835780114No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2390.1844733632813103No Hit
CATAGATTCAACCAGCCATCCCCAATCTGTTTACTCGGAGATTTGACTGT2390.1844733632813103No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG2370.18292965312832862No Hit
CATAGAGGCACAGGGATAATGAGGGAGCTTACACTGCACATGGGGTCTAT2290.17675481251640193No Hit
CATAGACCACACACACAACTGAGAGTACACTGGGAAAGGTATGTGGCACA2250.17366739221043856No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTAGACCTTTTTCTGTAGTC2250.17366739221043856No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC2240.17289553713394773No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2120.16363327621605767No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTAGACTCTGTTTACTCGGAGA2060.15900214575711263No Hit
CATAGATCCCATACTCCTCCATTACCCTCACTGAGCTGAGGGTCACTTCT2040.15745843560413098No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2020.1559147254511493No Hit
CATAGATATTCTGCCCCCTCCTCTCCGATAGCGAGAAGAGTGGAGGCTCT2010.15514287037465846No Hit
CATAGAAACAGCAAAGCCCTCCACCAACCAAAATGTCAGGGGATCCTCTA2000.1543710152981676No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT1970.1520554500686951No Hit
CATAGATCACCAGATGCCAGTTGTGCTATACGATAGCGAGAAGAGTGGAG1960.15128359499220426No Hit
CATAGACCATCCCTTCTACAAGAGGCATCTATGTGTAGAACCATGTCTTC1880.14510875438027757No Hit
CATAGACCAAGAGTTGACAAGGATCTGGATAGCGAGAAGAGTGGAGGCTC1880.14510875438027757No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT1870.1443368993037867No Hit
CATAGAAGTACCATCAGAGTGAACAGGCAGGGCAGAGAGTGTGTTGTATT1850.14279318915080505No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT1830.14124947899782336No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG1810.1397057688448417No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCTGTTTACTCGGAGATTTGACTG1810.1397057688448417No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAAACATTGGAAAGATGGGGATC1810.1397057688448417No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCACTGAGCTGAGGGTCAC1800.13893391376835085No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGTTTTCTGTTTACTCGGAGATTTG1790.13816205869186002No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCATGTCGTCAGTGGGTCACTGAC1760.1358464934623875No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1750.13507463838589667No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC1740.13430278330940582No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC1740.13430278330940582No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1720.13275907315642416No Hit
CATAGATCACCAGATGCCAGTTGTGCCATGCTGAAGTCCCATGATCTATG1690.13044350792695164No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTTCTGTTTACTCGGAGATTTG1680.12967165285046078No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT1640.12658423254449744No Hit
CATAGATATTCTGCCCCCTCCTCTCCAACAATGCCTCACACACAGGTCTA1620.12504052239151578No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGGCAACATATCAGAAGCATCT1610.12426866731502494No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1610.12426866731502494No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1600.12349681223853409No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGCAACAATGCCTCACACACAGGTC1580.12195310208555242No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT1580.12195310208555242No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTCCCCAGGTAGCAAAACAGA1560.12040939193257075No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGGAGGAGCTGACTTAC1520.11732197162660739No Hit
CATAGACACAGGCCAATCTCAGCAGAAGAGCTAAGGAGGAGCTGACTTAC1490.11500640639713487No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG1480.11423455132064403No Hit
CATAGAGGCACAGGGATAATGAGGGAGCCCCAGGTAGCAAAACAGAGTCT1480.11423455132064403No Hit
CATAGACCATCCCTTCTACAAGAGGCATCTATGTGTAGAACCATGTCGTC1460.11269084116766236No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC1450.11191898609117153No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACACTGTCTTCAGCTC1440.11114713101468068No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCAGCAGCATTCTCTCAGGG1430.11037527593818984No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGGAGAATGATATTGTTGC1430.11037527593818984No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGTGAGGAGGAGAATGATATT1420.10960342086169901No Hit
CATAGAGGCACAGGGATAATGAGGGAGTATGCAGGGCAGAGAGTGTGTTG1410.10883156578520817No Hit
CATAGACCACACACACAACTGAGAGTCCAGAGGAGAATGATATTGTTGCA1400.10805971070871734No Hit
CATAGAGGCACAGGGATAATGAGGGAGTGTGGGAAAGGTATGTGGCACAT1400.10805971070871734No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1380.10651600055573565No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1370.10574414547924482No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGGGAAAAGGGATAGGAGGGTC1360.10497229040275398No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1350.10420043532626314No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCATCCAGTCCAT1350.10420043532626314No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGGAGGAGAATGATATTGTT1340.1034285802497723No Hit
CATAGATCACCAGATGCCAGTTGTGCATTCTCTCAGGGCTGTTCTCTATG1330.10265672517328146No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1320.10188487009679062No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGAATCTTTGGGAGGCTATTAGTC1320.10188487009679062No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGGCAACATATCAGAAGCATC1320.10188487009679062No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)