FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807346

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807346
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences522232
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA8665816.593774414436496No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT448418.586413701190274No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG335216.418794711928798No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA203923.9047779530936446No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG137992.6423122290476266No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG133262.5517394567931495No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT119892.2957229736975138No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG97651.8698586069026795No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA96311.8441995128601847No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT96261.8432420839780022No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT87501.6755005438196053No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC83641.601587034115106No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG72001.3786975903429894No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG69541.3315920893396038No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT63091.2080837635380444No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG57941.1094685886732334No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT51870.9932367223762619No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT46880.8976853199344353No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA46870.8974938341579988No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC45350.8683879961396468No Hit
CATAGATAGCAGCAATCTCAGGCCTCGGTAGCAGAAGCTTTGAGATTTGT43410.8312397555109606No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT31070.5949463073882872No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG29440.5637341258291334No Hit
CATAGAGGGCTATCCTTGCTCAGATCACATTTATCGGGAGCCACAGATCT29290.5608618391825855No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC26700.5112670230855252No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA25460.4875227868073959No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA24530.469714609598799No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTGAGGTTTCCTGGGCATCAA23920.45803397723617084No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC21180.4055668744925627No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG20470.39197138436556933No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA20390.39043949815407714No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG20000.3829715528730526No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT19690.37703549380352025No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCACCAAAAGCACAAGGGA18830.36056771702997903No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTGAAACATTTTCTGG18420.3527168001960815No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGTCAGTGTGTGCCA17330.3318448505645001No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT16140.30905804316855345No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGTATGCAGTCTGTGAGCT15970.3058027849691325No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTGCCATTGTCGCCTTCTCTT15390.294696609935814No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG14320.27420763185710567No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT14120.27037791632837516No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC13420.25697391197781827No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC12880.24663368005024586No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG12720.24356990762726144No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGTAATTCTGGCCTTGTTCTATGTG12560.24050613520427705No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC12550.24031464942784053No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT11710.22422984420717226No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC11430.21886824246694958No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT11170.21388961227959985No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC10710.20508126656351966No Hit
CATAGATTTCTGTACCTCACTGCCGACACTGACACTATGGCTTAATGTTT10560.2022089799169718No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA9290.17789028630953294No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT8760.16774154015839704No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG8470.16218845264173776No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG8440.1616139953124282No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC8280.1585502228894438No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTCTGCTGCTCACTCTTTGG8200.15701833667795156No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT7940.1520397064906019No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGTAAACAAACTTCTGGCCCTCTA7680.1470610763032522No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTACTGCTGCTCACTCT7450.1426569034452121No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT7150.1369123301521163No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTTCGCGCAGAGCCTTCAGGTCA6800.13021032797683788No Hit
CATAGACTCACTCTGTCACCCAAGCTGCTGCTCACTCTTTGGGTTCTATG6720.12867844176534568No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT6590.12618912667167081No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGCTGCTGCTCACT6420.12293386847224987No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGC6240.1194871244963924No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCCTGCTGCTCACTCTTT6120.1171892951791541No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGCTGCTGCTCA6110.11699780940271758No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCATAGAGGTTTCCTGGGCA6020.11527443741478882No Hit
CATAGAACAATCAGGCACCCGCCATGCTGAAGTCCCATGATCTATGTGTA5920.11335957965042356No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCATGTACCAAAAGCACAAGG5730.10972134989812957No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA5570.10665757747514515No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)