FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170191
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG163839.626243455881921No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA95275.597828322296714No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG86815.100739757096439No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC73064.292823944861949No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC64373.782221151529752No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG60043.527801117567909No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG54893.225199922440082No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG54393.195821165631555No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA49622.9155478256782086No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG31461.848511378392512No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT30691.8032680929073805No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC25381.491265695600825No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT25101.47481359178805No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT24541.4419093841624997No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA21981.2914901493028421No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA21841.2832640973964546No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC20191.1863141999283158No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA18251.0723246235112316No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG18211.0699743229665493No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT17931.0535222191537743No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT16700.9812504774047982No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC15990.9395326427366899No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT15320.9001651086132638No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA15240.8954645075238996No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG14800.869611201532396No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT13960.8202548900940708No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA11410.6704232303705837No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT11210.6586717276471729No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC10780.6334059967918397No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA10770.6328184216556693No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGATCATTGTTCACT10710.629292970838646No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG9860.5793490842641502No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA8630.5070773425151742No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC7940.46653465811940703No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGCTATACCACACTACA7860.4618340570300427No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTTCAGGCTAATCTGAAATCTTCG7340.43128014994917474No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG6900.4054268439576711No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA6420.3772232374214853No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA6370.3742853617406326No Hit
CATAGATCATGGGACTTCAGCATGGCCACATAGAGTGTCTGTTTCCCCAC6260.36782203524275664No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAGTCGTGT5970.3507823562938111No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG5850.3437314546597646No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG5590.32845450111933067No Hit
CATAGAAGGACAAAGACATTTAGGACCCCATAGAGATCCCACCATTTGCC5410.3178781486682609No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT5360.31494027298740823No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTCTGGTGCATTACAGAG5250.30847694648953233No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC5120.3008384697193154No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAAACTGCTGGGGTTGCTCTAT5000.2937875680852689No Hit
CATAGATCATGGGACTTCAGCATGGCTTCTACAAAGGATTCTGGGCCATC4980.29261241781292785No Hit
CATAGATCATGGGACTTCAGCATGGCGTTCTACAAAGGATTCTGGGCCAT4980.29261241781292785No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC4970.2920248426767573No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA4820.2832112156341992No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT4760.279685764817176No Hit
CATAGACATTTAATCCTCACAATGACCCATGGAGACAGCCGCTCACCTCT4660.2738100134554706No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACACTGACGCTATACCACACT4530.2661715366852536No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCCCAACTGTCTCTGAAAAATTT4460.2620585107320599No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTGAGGAGCTGAGTCATGG4430.26029578532354825No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCATCAAGGAAGTTTCTGT4430.26029578532354825No Hit
CATAGAAAAAACAGTTGGCCAGGCATCACTGTGTGCTTGAACCAGATTCT4310.25324488368950177No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT4190.24619398205545534No Hit
CATAGAAGGACAAAGACATTTAGGACCCACCCCTGCAGTCTTTGGAGGAA4040.23738035501289725No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC3930.23091702851502136No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA3840.22562885228948654No Hit
CATAGATGGCCAAGATACGAGCACATCTGTTGGAGACAGCCGCTCACCTC3710.21799037551926953No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGAGACAGCCGCTCACCT3640.21387734956607576No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGATCATTGTTCACTG3400.19977554629798283No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATACGCTATACCACACTACACA3360.19742524575330067No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT3210.18861161871074264No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC3200.18802404357457211No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG3190.18743646843840156No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGGAGACAGCCGCTCACCTCT3160.18567374302988993No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGCCCTCTCTGCTGTTCCTT3080.18097314194052563No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC2990.17568496571499082No Hit
CATAGACACAACAGAGAGAACGGGCTTTCACACTGGGCCCCAGTGTGAAT2950.17333466517030865No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATCAAGGGGTAAGGCGTACTGG2870.16863406408094433No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTGGAGACAGCCGCTCAC2870.16863406408094433No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGCCCTCTCTGCTGTT2820.16569618840009168No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGGGTTACCACCTTGCAAGA2720.15982043703838628No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATAGAGCTGTCTGCCTCTA2690.15805771162987467No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA2660.15629498622136304No Hit
CATAGATCATGGGACTTCAGCATGGCTGATGCTGAAGTGATGGGCTAGAT2640.15511983594902198No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGGCTCAGGTATGTCTTT2630.15453226081285143No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTGCAGAAGTAGGAAGTATT2610.15335711054051038No Hit
CATAGACACAACAGAGAGAACGGGCTGAGGAGCTGAGTCATGGGGTCTAT2590.1521819602681693No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGCATTGCTTCTTGTGGTAA2560.1504192348596577No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2480.14571863377029337No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGTTCTACACATAGAGTGTCT2420.14219318295327013No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2190.12867895482134778No Hit
CATAGATCCACGTGAGAATAAAGCATACACACTGACGACATGGTTCTACA2050.12045290291496025No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGGAGACAGCCGCTCAC2020.11869017750644863No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGGTGGAAGGGTAAGAGAGGGT2000.11751502723410757No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCATCAGGAACCATGGG1950.11457715155325487No Hit
CATAGACCTCCGACAGTTTTTATGCACAAATGAGAAACCTGGATGCTTCT1940.11398957641708433No Hit
CATAGACCTCCGACAGTTTTTATGCAGAAGTAGGAAGTATTACCCCTCTA1880.11046412560006111No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGGTCTACCAGTTATTAGTTGA1870.10987655046389058No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGCTCAGGTATGTCTTTAT1870.10987655046389058No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGAGGAGAATTCAAGCT1860.10928897532772003No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCATGACAGAGCGAGACTTCTATG1800.1057635245106968No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGGCTCAGGTATGTCTTTATT1770.1040007991021852No Hit
CATAGAGAAGACTCCCTCAACCCACCCGACATGGTCTACCAGTTATTAGT1740.10223807369367359No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)