FastQCFastQC Report
Wed 8 May 2024
EGAF00005807350

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807350
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170191
Total Bases25.5 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA161109.465835443707364No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA95245.596065596888202No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG85985.051971020794284No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC73754.333366629257716No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG64543.792209928844651No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG59713.5084111380742815No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG54303.1905329894060204No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG53003.1141482217038505No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA49962.935525380308007No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG31301.8391101762137831No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT30211.7750644863711948No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC25111.4754011669242204No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT24941.4654123896093214No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT24131.4178188035795076No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA21831.282676522260284No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT21521.2644616930389974No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA19981.1739751220687344No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT17971.0558725196984564No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG17731.0417707164303636No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT17691.0394204158856815No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT16760.9847759282218214No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC16030.9418829432813721No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT15060.8848881550728299No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG14880.8743118026217602No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG14530.8537466728557914No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT13780.8096785376430011No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT11320.6651350541450488No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT11090.6516208260131264No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG10730.630468121110987No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC10700.6287053957024754No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT10540.6193041935237469No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGGTCCTAAATGTCTT10410.6116657167535299No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG9530.5599591047705226No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG8590.504727041970492No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAACTGGCTTGATTGCAC7830.46007133162153113No Hit
CATAGATGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGCAACT7520.44185650240024443No Hit
CATAGAACACGAAGATTTCAGATTAGCCTGAACACGAATGAGGAAACAGG7220.42422924831512826No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG6800.39955109259596566No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA6420.3772232374214853No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT6160.36194628388105127No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGGCCATGCTGA6080.357245682791687No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC5960.3501947811576406No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG5740.33726812816188867No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG5470.3214035994852842No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT5370.31552784812357876No Hit
CATAGATGGCAAATGGTGGGATCTCTATGGGGTCCTAAATGTCTTTGTCC5280.31023967189804397No Hit
CATAGATCTCCTCTCTGTAATGCACCAGACACTGACGCCATGCTGAAGTC5040.29613786862995106No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG4970.2920248426767573No Hit
CATAGATGGCCCAGAATCCTTTGTAGAAGCCATGCTGAAGTCCCATGATC4920.2890869669959046No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT4900.28791181672356353No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACGCCATGCTGAAGTCCCATGAT4880.2867366664512224No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA4780.28086091508951705No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC4750.27909818968100547No Hit
CATAGAGGTGAGCGGCTGTCTCCATGGGTCATTGTGAGGATTAAATGTCT4650.2732224383193001No Hit
CATAGATCTCACAGAAACTTCCTTGATGACACTGACGAATGAGGAAACAG4420.25970821018737766No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGCATTAGGAAGTCTTC4400.2585330599150366No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACCCTGGGAGAAGAAATGTTGGT4330.2544200339618429No Hit
CATAGAATCTGGTTCAAGCACACAGTGATGCCTGGCCAACTGTTTTTTCT4280.2514821582809902No Hit
CATAGACCCCATGACTCAGCTCCTCACACTGACCAACATGCTTTTAGTCA4230.2485442826001375No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTGGGTCCTAAATGTCTTTGTCCT4000.23503005446821515No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC3950.23209217878736246No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT3880.22797915283416867No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG3880.22797915283416867No Hit
CATAGAGGTGAGCGGCTGTCTCCAACAGATGTGCTCGTATCTTGGCCATC3730.21916552579161058No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGTCATTGTGGGTTTTAACTACT3670.21564007497458737No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTTACAAAAATTGGGA3340.19625009548095962No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTATAGATGCCTGGCCAACTGTTTT3320.19507494520861854No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGACAGTTGTGGAAAGTGCAAT3240.19037434411925425No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT3220.1891991938469132No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTAGCCCGTTCTCTCTGTTGTGT3140.18449859275754887No Hit
CATAGAGGTGAGCGGCTGTCTCCATAGATGCCTGGCCAACTGTTTTTTCT3120.1833234424852078No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG3090.1815607170766962No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC3040.1786228413958435No Hit
CATAGAGGTGAGCGGCTGTCTCCACACATAGATGCCTGGCCAACTGTTTT2930.17215951489796757No Hit
CATAGAAGTATTCACACTGGGGCCCAGTGTGAAAGCCCGTTCTCTCTGTT2890.16980921435328541No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGTCTGAGAAAAGATGCAGTAC2860.1680464889447738No Hit
CATAGACCAGTACGCCTTACCCCTTGATAGATGCCTGGCCAACTGTTTTT2850.16745891380860328No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGAAATGATTTCCCTTGAA2750.1615831624468979No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT2710.15923286190221575No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACCCTGGGAGAAGAAA2670.1568825613575336No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCCATGCTGAAGTCCCATGAT2650.1557074110851925No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGCTCTATGTGTAGCCATGCTG2650.1557074110851925No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC2630.15453226081285143No Hit
CATAGACCAGTTACCACAAGAAGCAATGCTCCCATGATTTACCATCACAA2560.1504192348596577No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT2550.14983165972348714No Hit
CATAGACCCCATGACTCAGCTCCTCAGCCCGTTCTCTCTGTTGTGTCTAT2520.14806893431497553No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCACCGTAGCCATGCTGAAGTCC2510.147481359178805No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA2150.12632865427666562No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG2090.12280320345964241No Hit
CATAGACCCTCTCTTACCCTTCCACCCTTCCTTTCAATAGCCTTTTAGGT2010.1181026023702781No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGACGCCATGCTGAAGTCCCATG1960.11516472668942541No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTGTATGCT1940.11398957641708433No Hit
CATAGACCTCCCATGGTTCCTGATGACCTCCCATGATTTACCATCACAAA1930.1134020012809138No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTGCATAAAAACTGTCGGAGGTCT1910.11222685100857271No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGAGCATGCCTTTGAT1910.11222685100857271No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACTGTTAATATAGAAGAGACACAC1900.11163927587240219No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATAAAAACTGTCGGAGGTCTA1880.11046412560006111No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGCCATGCTGAAGTCCC1840.10811382505537896No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCTATGTGTAGAACCATGTCGTC1790.10517594937452628No Hit
CATAGAAGTCTCGCTCTGTCATGCATTAGGAAGTCTTCTCAGCTTCTATG1760.10341322396601464No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT1730.10165049855750304No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGGGTGGGTTGAG1730.10165049855750304No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGGGCTGGTGTTTTCCT1720.10106292342133251No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)