FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129654
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA111298.583614851836426No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT108278.350687213660974No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT75375.813164267974764No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA68135.254754963209773No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT63664.909991207367301No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA57384.42562512533358No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG51173.946658028290681No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT38272.951702222839249No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA21261.6397488700695697No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA21091.6266370493775741No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA19531.5063168124392614No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA18191.4029648140435313No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT17111.3196661884708532No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG17041.3142672034800316No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA15221.1738935937186665No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA14211.0959939531368101No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGAGGAGGAGCTGAC13241.0211794468354236No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC12640.9749024326283803No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT11790.909343329168402No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT11600.8946889413361716No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG11580.8931463741959369No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA11420.8808058370740587No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT11090.8553534792601849No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG9200.7095808845079982No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC8560.6602187360204853No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG7890.6085427368226202No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT7800.6016011846915638No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT7730.596202199700742No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7170.5530103197741681No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6720.5183025591188857No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC6610.5098184398475943No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC6530.5036481712866553No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA6100.4704829777716075No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5830.44965832137843803No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5470.421892112854212No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT5400.41649312786339027No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT5350.41263671001280333No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT5150.39721103861045554No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT5120.3948971879001033No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG4940.38101408363799033No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4630.35710429296435126No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC4500.3470776065528252No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA4490.3463063229827078No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT3740.2884600552239036No Hit
CATAGATCCCATACTCCTCCATTACCCTGTACTTTTCTAATCAATAGTAC3660.2822897866629645No Hit
CATAGACCACACACACAACTGAGAGTTACGGAAGACACAGCACACTCTTC3470.2676353988307341No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC3450.26609283169049935No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGAAGCAGAGGTAGATGGA3400.26223641383991236No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3310.2552948617088559No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT2980.229842503894982No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2950.22752865318462984No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA2790.21518811606275165No Hit
CATAGACCACACACACAACTGAGAGTCTGGGTAGAGAGTTCTGTAGATGT2770.21364554892251683No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACTTTTCTAATCAATAGTACCCTA2770.21364554892251683No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2740.21133169821216466No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2680.20670399679146037No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTGTGTGTGTGGATAGCGAGAAG2640.2036188625109908No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT2630.2028475789408734No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT2470.19050704181899517No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA2470.19050704181899517No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTAACGGCAACATATCAGAAGCA2420.18665062396840823No Hit
CATAGATCACCAGATGCCAGTTGTGCAGGGCAGAGAGTGTGTTGTATTCT2320.17893778826723433No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC2300.17739522112699954No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA2290.17662393755688216No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGGCAACATATCAGAAGCATC2290.17662393755688216No Hit
CATAGAAGTACCATCAGAGTGAACAGGCACACGGAAGACACAGCACACTC2180.16813981828559088No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2120.16351211686488654No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTAGCACTATTCTCTGGCCC2120.16351211686488654No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT2060.1588844154441822No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG2060.1588844154441822No Hit
CATAGAGCCCCCAGAGAAGAATGACCGGAGCCCCCAGGTAGCAAAACAGA1950.15040029617289094No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT1920.14808644546253877No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1830.14114489333148225No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGGCATTCTCTCAGG1820.14037360976136484No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1810.13960232619124746No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1810.13960232619124746No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT1770.1365171919107779No Hit
CATAGACCATCCCTTCTACAAGAGGCACATAGGAGGAGCTGACTTACTGT1760.13574590834066053No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT1740.13420334120042574No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGCTTACACTGCACATGGGGTC1710.1318894904900736No Hit
CATAGATCACCAGATGCCAGTTGTGCGGAAGACACAGCACACTCTTCTAT1690.1303469233498388No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT1690.1303469233498388No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1600.1234053712187823No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGTTTACTCGGAGATTTGAC1590.12263408764866492No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGATAGCGAGAAGAG1580.12186280407854753No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1520.11723510265784318No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1490.114921251947491No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT1480.11414996837737362No Hit
CATAGAGGCACGATCTTGTTTCACTGTACGATAGCGAGAAGAGTGGAGGC1480.11414996837737362No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1470.11337868480725624No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTTTCCCCAGGTAGCAAAACAGAG1460.11260740123713886No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAATCTTTGGGAGGCTATTAGTCT1460.11260740123713886No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1440.11106483409690407No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT1410.1087509833865519No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACTTGGTCACTGACAG1340.10335199839573019No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTTAGGAATCTTTGGGAGGCT1310.10103814768537801No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)