FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70254
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3087743.95052239018419No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG22573.2126284624363026No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA17362.4710336777977053No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA15932.2674865488086087No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG15902.263216329319327No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA11981.705240982719845No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC10191.4504512198593675No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG7991.1373017906453726No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG7681.0931761892561278No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC7521.0704016853132916No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC7231.0291228969169015No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG6770.9636461980812481No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT4100.5835966635351724No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT2810.39997722549605713No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAGTTTTTCCAAATATAAGAT2800.39855381899962994No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG2800.39855381899962994No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA2710.3857431605317847No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA2550.36296865658894867No Hit
CATAGAACACAGATCTGCTTGGAGGTGATCTATGTGTAAGCATGTTGAGA2400.34161755914253994No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT2220.31599624220684946No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC2190.31172602271756766No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA2140.3046089902354314No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA2070.2946451447604407No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT1960.27898767329974095No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT1900.27044723432117745No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA1900.27044723432117745No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA1880.2676004213283229No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGTTTTTCCAAATATAAGATC1870.2661770148318957No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT1820.25905998234975947No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC1800.25621316935690497No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGCCATGGGTCCTTTTC1770.25194294986762317No Hit
CATAGACCCTTCTCCATGCCACATCATCCCATGGGTCCTTTTCACATCAT1750.24909613687476867No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT1690.2405556978962052No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA1640.23343866541406894No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTGACGACATGGTTCTA1620.23059185242121444No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1620.23059185242121444No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG1580.22489822643550544No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA1530.2177811939533692No Hit
CATAGATCAACAATGGATGAGCAAAAGGGATTATCAGTAGTGCTCACATC1530.2177811939533692No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC1480.21066416147123296No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1440.20497053548552396No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG1430.20354712898909672No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1420.20212372249266944No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1380.19643009650696044No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA1320.18788965752839698No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCGGAGGGAAGGAAGGG1320.18788965752839698No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG1320.18788965752839698No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCAGCATGTTGAGATGA1300.18504284453554246No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1300.18504284453554246No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTAGCATGTTGAGATG1290.1836194380391152No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1270.1807726250462607No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG1270.1807726250462607No Hit
CATAGAAGGAGGGGAAACTGAGGCCAATAGAGGAGGGAAGGAAGGGCAAA1250.1779258120534062No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGCATGTTGAGATGAATAATTG1240.17650240555697896No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAAGGCCCAAAAACCTATTGGGGTG1230.17507899906055172No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1210.17223218606769722No Hit
CATAGACCATTTGCCGCGTTCTGAAGATCATTTCCCCTCTCTCTGAATAA1160.16511515358556098No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1160.16511515358556098No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1140.16226834059270648No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1110.15799812110342473No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTTAGGAAAGCAATCACCGCCAG1090.15515130811057024No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA1090.15515130811057024No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG1080.15372790161414296No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGCCATGGGTCCTT1060.15088108862128846No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC1040.14803427562843396No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1010.14376405613915222No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA940.13380021066416145No Hit
CATAGAAGGAGGGGAAACTGAGGCCAATTTGTGCTGACTTCCCAAAGCTG930.13237680416773423No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG920.13095339767130698No Hit
CATAGAAGATGGTCTGCTACACTGGTGTTCCACACTCATGCAAAGCTGGT910.12952999117487973No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGTGCGGTGGCTCATGCCTGTAAT880.125259771685598No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA870.12383636518917072No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC850.12098955219631623No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC840.11956614569988896No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCACACTCATGCAAAGCTGGT830.11814273920346173No Hit
CATAGACCCTTCTCCATGCCACATCATGACCATGGGTCCTTTTCACATCA820.11671933270703447No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAACTCAGTT820.11671933270703447No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA810.11529592621060722No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG750.10675548723204373No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCCCAAAAATCTTTTTC750.10675548723204373No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA750.10675548723204373No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG730.10390867423918923No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACTTCTTATAGC710.10106186124633472No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAGAAGTAAGGTGACTCTCCCCAG710.10106186124633472No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)