FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152456
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1682711.037282888177574No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT66174.340268667681167No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT65854.319279005089993No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA64604.23728813559322No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG55563.6443301673925594No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT52243.4265624180091305No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA41672.7332476255444194No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA30341.9900823844256705No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA26041.7080337933567717No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA25811.6929474733693655No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT23251.5250301726399749No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG23071.5132234874324395No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG22741.4915778978852914No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT20911.371543264942016No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGAAGTGTATTAATTAT20011.3125098389043397No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA16051.0527627643385633No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT14980.9825785800493256No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT14830.9727396757097129No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA13810.9058351262003463No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGCAACATATCAG13590.8914047331689143No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC12890.8454898462507215No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT12690.8323713071312377No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC12100.7936716167287611No Hit
CATAGAGGCACGATCTTGTTTCACTGTTACGGAAGACACAGCACACTCTT11990.7864564202130451No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACGATAGCGAGAAGAGTGGAG11420.7490685837225166No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATACGGCAACATATCAGAAGCA10780.7070892585401689No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT10660.6992181350684787No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT10590.6946266463766595No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9870.6473999055465183No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT9600.6296898777352155No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG9400.6165713386157318No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA9150.6001731647163772No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC8190.5372041769428557No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA8180.5365482499868814No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA8170.5358923230309073No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG7960.5221178569554494No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCTTGGTCTCTTGCTCC7670.5030959752321982No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGAGGAGAATGATA7530.4939129978485596No Hit
CATAGAAACAGCAAAGCCCTCCACCAGACCTTTTTCTGTAGTCAAGTGAT7250.4755470430812825No Hit
CATAGAGGCACAGGGATAATGAGGGAGAAGTGTATTAATTATCTATGGCT6750.4427506952825734No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTCAGGAGGAGCTGACTTACTGT6670.43750327963477986No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT6480.4250406674712704No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC6080.3988035892323031No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC6000.3935561735845096No Hit
CATAGAGGCACAGGGATAATGAGGGAGACCTTTTTCTGTAGTCAAGTGAT5920.38830875793671615No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA5840.38306134228892275No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTATGTCCATCCAGTC5740.3765020727291809No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT5600.36731909534554236No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGCAGGGCAGAGAGT5470.3587920449178779No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT5380.3528887023141103No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC5350.35092092144618775No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTTGGGAAAGGTATGT5260.3450175788424201No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCAGGGCAGAGAGTG5230.34304979797449753No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTACGGCAACATATCAGAAGCAT5220.34239387101852337No Hit
CATAGAGGCACAGGGATAATGAGGGAGTATTGTATATCTAGGAGTAGAAC5140.3371464553707299No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT4520.2964789841003306No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCCGTCTGTTTACTCGGAGA4440.2912315684525371No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA4240.2781130293330535No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4150.27220968672928586No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT4140.27155375977331164No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA4110.2695859789053891No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG3860.2531878050060345No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC3700.2426929737104476No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATAGGGCACTGAGACCACATCTA3490.22891850763498978No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3440.22563887285511883No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC3370.22104738416329955No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA3360.22039145720732536No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3250.2131762606916094No Hit
CATAGAGTGATCCTCCTTTCTCAGCCACCCATAGACCTTTTTCTGTAGTC3000.1967780867922548No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGCCATGCTGAAGTCCC2990.19612215983628062No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCTTCCACTACCCACCTGCCTC2920.19153067114446137No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA2830.18562732854069372No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA2790.183003620716797No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2720.17841213202497772No Hit
CATAGAGGCACGATCTTGTTTCACTGTTCATAGGGCACTGAGACCACATC2640.17316471637718425No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2590.16988508159731333No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT2560.1679173007293908No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCATAGGGCACTGAGACCAC2400.15742246943380386No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2370.1554546885658813No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2330.15283098074198456No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2310.1515191268300362No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACACTGACGGCAACATATCAGA2260.1482394920501653No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT2140.1403683685784751No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG2120.13905651466652674No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2060.13512095293068163No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA2050.13446502597470744No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2030.1331531720627591No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCAGCATTC1980.12987353728288817No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1910.1252820485910689No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1880.12331426772314634No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA1840.12069055989924961No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1680.11019572860366268No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGACCTTTTTCTGT1650.10822794773574014No Hit
CATAGAAGTACCATCAGAGTGAACAGGCAACCTACAAAATGGGAGAAAAT1640.10757202077976595No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAAATACAAAACTTATCTGGGCA1630.10691609382379179No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTTCCTTCCACTACCCACCTGCCT1610.10560423991184341No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1600.10494831295586923No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCAGCATTCTCTCAGGGCTGTTCT1550.10166867817599833No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)