FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12448
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG631950.76317480719794No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA2792.241323907455013No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG2752.209190231362468No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA2351.887853470437018No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC2051.6468508997429305No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG1891.5183161953727506No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG1651.3255141388174807No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1251.0041773778920309No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC1160.9318766066838047No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG970.7792416452442159No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACACTGACGACATGGTTCT840.6748071979434447No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC810.650706940874036No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG760.6105398457583547No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG580.46593830334190234No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG480.3856041131105398No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT470.3775706940874036No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA470.3775706940874036No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG460.36953727506426737No Hit
CATAGACACCTGGATCCTGTGTTGTCTATGAGACAGCATGTTGAGATGAA460.36953727506426737No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT450.3615038560411311No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG410.32937017994858614No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGCCATGGGTCCTTTTC350.28116966580976865No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA330.26510282776349614No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC330.26510282776349614No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAAGCATGTT320.2570694087403599No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACATAGATTAAGTGCAGCT320.2570694087403599No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT310.24903598971722363No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC290.23296915167095117No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG290.23296915167095117No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT290.23296915167095117No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG260.2088688946015424No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCACACTGACGCCATGGGTCCT260.2088688946015424No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA250.20083547557840617No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAATCTCTGC240.1928020565552699No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA240.1928020565552699No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA230.18476863753213368No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG230.18476863753213368No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG220.17673521850899743No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTAGTGCAGCTATATTGGAGG220.17673521850899743No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA210.16870179948586117No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG210.16870179948586117No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT200.16066838046272494No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA200.16066838046272494No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG200.16066838046272494No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA200.16066838046272494No Hit
CATAGAAGGAGGGGAAACTGAGGCCACTGCCAGGCCCACAGATACTGTGC200.16066838046272494No Hit
CATAGACTCAAGCAATCCTCCCACCTACACTGACGACATGGTTCTACACA200.16066838046272494No Hit
CATAGAAGGAGGGGAAACTGAGGCCACAAAAGGTGGAAGGAGGCTTTTCC190.15263496143958868No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG190.15263496143958868No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT180.14460154241645243No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA170.1365681233933162No Hit
CATAGATCATGCAAAGAACACAGGCCTTTCAGCATCTCTTTGGCTCTATG170.1365681233933162No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT170.1365681233933162No Hit
CATAGGTCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG160.12853470437017994No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCACACTCATGCAAAGCTGGT160.12853470437017994No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG150.1205012853470437No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG150.1205012853470437No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA150.1205012853470437No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT150.1205012853470437No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG140.11246786632390746No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT140.11246786632390746No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC140.11246786632390746No Hit
CATAGATCATGCAAAGAACACAGGCCGGGCGCAGTGGCTCACACCTGTAA130.1044344473007712No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG130.1044344473007712No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGCCATGTCTTCTGTGTTTG130.1044344473007712No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG130.1044344473007712No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAATTCTTAT130.1044344473007712No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCGGAGGGAAGGAAGGGCAAAC130.1044344473007712No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)