FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108710
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1282411.796522858982614No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT51574.743813816576211No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG47224.3436666360040475No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA35973.308803237972588No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA34103.136785944255358No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT29772.73847852083525No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT21802.005335295740962No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG20691.9032287738018583No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT18021.6576211940023917No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA17971.653021801122252No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA17821.6392236224818324No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG16711.5371171005427282No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC13721.262073406310367No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG12961.1921626345322418No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA12781.1756048201637384No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA12541.153527734339067No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA9640.8867629472909576No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA9340.8591665900101186No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9250.850887682825867No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT9140.8407690184895594No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT9050.8324901113053076No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA8980.8260509612731121No Hit
CATAGAACCAACCTCTCTATCTCCGTACAACCAAAATGTCAGGGGATCCT8770.8067335111765247No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT8550.7864961825039094No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGGCAACATATCAGA8210.7552203109189587No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT7940.7303835893662036No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC7630.7018673535093367No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCACTGAGCTGAGGGTCAC7360.6770306319565818No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGATAGCGAGAAGAGTGGAG6930.6374758531873793No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT6850.6301168245791555No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6840.6291969460031276No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT6430.5914819243859811No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT6010.5528470241928066No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5970.5491675098886947No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAAACATTGGAAAGATGGGGA5460.5022537025112686No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGCAACATATCAGAAGC5460.5022537025112686No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGGGAAAGGTATGTGGC5430.4994940667831846No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5010.46085916659001014No Hit
CATAGAGGCACGATCTTGTTTCACTGTACCGTACAGGGCAGAGAGTGTGT4790.4406218379173949No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT4660.4286634164290314No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA4660.4286634164290314No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC4650.4277435378530034No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGAAGACACAGCACACTCTTC4550.41854475209272374No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4460.4102658449084721No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC4420.4065863306043602No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA4410.40566645202833224No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA4140.3808297304755772No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT4010.36887130898721365No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCTGTTTACTCGGAGATTTG3990.3670315518351578No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACTTTTCTAATCAA3910.35967252322693405No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCCTCATAGAGCAGCATTCTCTCA3760.34587434458651456No Hit
CATAGATCACCAGATGCCAGTTGTGCCATGCTGAAGTCCCATGATCTATG3740.34403458743445864No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA3700.3403550731303468No Hit
CATAGATCCCATACTCCTCCATTACCCTACCTACTTTTCTAATCAATAGT3580.3293165302180112No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3560.3274767730659553No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3370.30999908012142396No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3360.309079201545396No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAATCTTTGGGAGGCTAT3340.3072394443933401No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3280.3017201729371723No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT3260.29988041578511637No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTGGGAAAGGTATGTGGCACA3230.29712078005703246No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGATAGCGAGAAGAGTGGAGGC3090.284242479992641No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2900.26676478704810963No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGGGCACTGAGACCACATCTAT2890.2658449084720817No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATAGGAATCTTTGGGAGGC2870.2640051513200258No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCTGTTTACTCGGAGATTTGA2870.2640051513200258No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGTAGGAATCTTTGGGAGG2850.26216539416796986No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAAACATTGGAAAGATGGGGAT2790.25664612271180204No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT2740.2520467298316622No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGCACTATTCTCTGGCCCGTCT2730.2511268512556343No Hit
CATAGAGGCACGATCTTGTTTCACTGTTACGGCAACATATCAGAAGCATC2700.24836721552755037No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2670.24560757979946646No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2640.2428479440713826No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2560.23548891546315887No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTACGATAGCGAGAAGAGTGGAG2500.22996964400699105No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2380.2189311010946555No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGCTAGGAATCTTTGGGAG2360.21709134394259955No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT2350.2161714653665716No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGGTAGCAGAGACCTTTTTCTG2300.2115720724864318No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTCCTTCCACTACCCACCTGCCT2240.20605280103026402No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACAGAAGTGTATTAATTATC2190.20145340815012416No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2170.19961365099806827No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGTAGCAGACCTTTTTCTG2120.19501425811792844No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT2080.1913347438138166No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT1990.1830558366295649No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTACGGCAACATATCAGAAGCAT1970.18121607947750895No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGATAGCGAGAAGAGTGG1950.17937632232545303No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1900.17477692944531323No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGGTGCAATATGGGCTGGGT1850.1701775365651734No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGTAGAAGTGTATTAATTATC1790.1646582651090056No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1770.1628185079569497No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT1750.16097875080489374No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCGTCAGTGTGAGGAGAATGAT1730.15913899365283782No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTATAGACCTTTTTCT1660.15269984362064207No Hit
CATAGACCCCCTTGAGTTCACTGGACCCTTGAGGTCACTGACAGGTCTTA1640.15086008646858615No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1600.1471805721644743No Hit
CATAGATACCTGTCCTCTGCCTCGAGACACTGACGGCAACATATCAGAAG1600.1471805721644743No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACGGCAACATATCAGAAGCAT1560.14350105786036244No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1550.14258117928433447No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGTAGCAGAGACCTTTTTCTG1540.1416613007083065No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATTAATTATCTATGGGAAAGGTA1510.13890166498022263No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCTATGGTGCAATATGGGC1510.13890166498022263No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT1470.13522215067611074No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAGGAGCTGACTTACTGTTC1390.12786312206788705No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT1380.12694324349185906No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTAGAAGTGTATTAATTA1380.12694324349185906No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGGAAACATTGGAAAGATG1370.1260233649158311No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1310.12050409345966333No Hit
CATAGAAACAGCAAAGCCCTCCACCAGAAACAGCAAAGCCCTTCCACTAC1290.11866433630760741No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT1260.1159047005795235No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTAGTGCAATATGGGCTGGGTGA1250.11498482200349552No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCACATAGACTCTGTTTACTCGG1250.11498482200349552No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1250.11498482200349552No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1230.1131450648514396No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1210.11130530769938368No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1200.11038542912335572No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1190.10946555054732775No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGACCTTTTTCTGT1160.10670591481924385No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1120.10302640051513201No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT1110.10210652193910404No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)