FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences552898
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA9776117.681561517675956No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG404287.312017768195942No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG316995.733245553429385No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT305805.530857409504104No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC262274.743551251767957No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG197143.565576290744405No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG193283.495762328675452No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG148572.6871140789078636No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG77871.408397208888439No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA60271.090074480283886No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA59941.0841059291225505No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT58181.0522736562620953No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC52250.9450206005447659No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT52220.9444780049846446No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC48690.8806325940770269No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA48630.879547402956784No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT43630.7891148096032179No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC42860.7751881902267688No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA38720.700310002930016No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG34260.619644129658635No Hit
CATAGATTAGGGGTGACGGACTAGCCTGATGTGGCATGGAGAAGGGTCTA30820.5574265054313816No Hit
CATAGATGACCTGTTAATCTGCCCCCCTTGGCCTCAGTTTCCCCTCCTTC30400.549830167589682No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA29940.5415103690011539No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA29220.5284880755582404No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC29120.526679423691169No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG29060.5255942325709263No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC28000.5064225227799704No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGTAGCAAAGCTGCTATGGGA27940.5053373316597274No Hit
CATAGATTAGGGGTGACGGACTAGCCCTCATAGATGATGTGGCATGGAGA27090.4899637907896212No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA26690.48272918332133596No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATGTGGCATGGAGAAGGGTCT24720.4470987415400309No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG23230.4201498287206682No Hit
CATAGATGTGAGCACTACTGATAATCCCTGACTTGGCCTCAGTTTCCCCT21020.38017862245839196No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT20170.36480508158828573No Hit
CATAGATGTGAGCACTACTGATAATCCCTGGGAGACACTGGGGGCACAAA19970.3611877778541431No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG18180.3288129094335664No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG18130.3279085835000307No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACACCAGTGTAGCAGACCATCTT16070.2906503550383615No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT15510.2805219045827621No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTATGTGTAGAACCATGTC15360.27780892678215513No Hit
CATAGACTTCTGTTTGGTCACATGCTCAGTGTACCAGTGTAGCAGACCAT14920.2698508585670413No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCAACCAGTGTAGCAGACCATC14500.2622545207253418No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG13750.24868963172230682No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAC13570.24543405836157844No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG13350.24145502425402154No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT12890.23313522566549344No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATTATGACCTCTCTCATA12400.224272831516844No Hit
CATAGACCAAACACAGAAGACATGGCAAAGCTGCTATGGGATCTTCTATG12180.22029379740928703No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG12080.21848514554221574No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT11570.20926102102015198No Hit
CATAGACACACCCAACTCTGCTCAGTGTACTCAGTCTGCATAGCCACATC10940.19786651425760265No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT10890.19696218832406703No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA10710.19370661496333863No Hit
CATAGATTAGGGGTGACGGACTAGCCGACTCAGTCTGCATAGCCACATCT10690.19334488458992435No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGGGGCACAAAGT10620.19207882828297443No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA9940.17977999558688945No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACACTGGGGGCACAAAGTT9440.17073673625153282No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGGTAGTAGAGACTTGGCCTCAGTT9350.16910894957116862No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATTACAAGTTCTATGACCATC9250.16730029770409732No Hit
CATAGACCTGACCTCATGATCTGCCTGATGTTTTAAAATGAGCACCTAAC9240.1671194325173902No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA9200.16639597177056165No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT9200.16639597177056165No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA8980.16241693766300475No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT8950.16187434210288335No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA8370.15138416127386967No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTATGTGGGGCGAAAGTGA8190.1481285879131413No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT8190.1481285879131413No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACCCTTCGCCATGCTGAA8090.14631993604607No Hit
CATAGACCAGCTTTGCATGAGTGTGGCAGACCATCTTCTATGGTAGAACC7830.14161744119168454No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTGAGGTAAAACT7700.1392661937644918No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT7610.1376384070841276No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG7140.1291377433088924No Hit
CATAGACTTCTGTTTGGTCACATGCTCAGTGTAGAAATACCTGGGCGACC7070.12787168700194249No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGAAGTCCCAGGGCGAAAG6930.12533957438804263No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGAGACTTGGTCTCATAGA6490.11738150617292883No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTATGTCTTCAGAACGCGG6470.11701977579951456No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA6290.11376420243878618No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGGAGACACTGGGGGCAC6230.11267901131854338No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGACTTGGCCTCAGTTTCCCCTCCT6180.11177468538500772No Hit
CATAGACTTACTGCCCTCACTCCGTCAGTGTAGGTGGGAGGATTGCTTGA6070.10978516833122928No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA6040.10924257277110787No Hit
CATAGACACACCCAACTCTGCTCAGTCTACTCAGTCTGCATAGCCACATC5720.10345488679647963No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)