FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102772
Sequences flagged as poor quality0
Sequence length150
%GC46

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2201721.423150274393805No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG60445.880979255050014No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG42874.171369633752383No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA36613.5622543105125906No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG22252.1649865722181136No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC20712.015140310590433No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC19171.8652940489627525No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT17871.7388004514848403No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG14251.3865644338924998No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA14131.3748881018176158No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG13731.335966994901335No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA12451.2114194527692368No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA11801.1481726540302806No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA11531.1219009068617911No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA10811.051842914412486No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC7880.7667458062507297No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC5490.5341921924259526No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA5490.5341921924259526No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT5200.5059743899116491No Hit
CATAGAGGTCGCAGCTACCCAGAAAGATGCCATGTCTTCTGTGTTTGGTC5160.502082279220021No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG5130.49916319620129995No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC4810.46802631066827544No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT4760.4631611723037403No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATAGCAGGGATTATCAGTAGTGCT4710.4582960339392052No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCACCATGGGTCCTTTTCACATCATC4300.4184018993500175No Hit
CATAGACACCTGGATCCTGTGTTGTCTTAGGTAGAGGAGTTTCAAACATC4300.4184018993500175No Hit
CATAGAGGTCGCAGCTACCCAGAAAGGCAGATCATGAGGTCAGGTCTATG4230.4115907056396684No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG4060.39504923520024915No Hit
CATAGAACACAGATCTGCTTGGAGGTAGCATAGAGTAACCTCCTCCAGTC4020.391157124508621No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC3650.35515510061106137No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG3600.35028996224652625No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGAGCAGAGTTGGGTGTGTC3450.335694547152921No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT3430.33374849180710703No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG3430.33374849180710703No Hit
CATAGACCATTTGCCGCGTTCTGAAGGCAGATCATGAGGTCAGGTCTATG3380.3288833534425719No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAAGCATGTT3160.3074767446386175No Hit
CATAGAGGGGCATGCTGGATAAATCTACGGGGGCAGATTAACAGGTCATC3110.30261160627408246No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG3000.29190830187210526No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG2800.2724477484139649No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGCATGTTGAGATGAATAATTG2710.26369049935780176No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT2670.25979838866617366No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC2620.2549332503016386No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCTACGGGGGCAGATTAACAGG2560.2490950842641965No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA2520.2452029735725684No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC2480.2413108628809403No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAGACGTGCT2460.2393648075351263No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT2450.2383917798622193No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC2390.23255361382477718No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG2360.22963453080605614No Hit
CATAGATCACCTACACAGACAGCTTTCCCATGGGTCCTTTTCACATCATC2330.22671544778733507No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA2310.22476939244152105No Hit
CATAGACCATTTGCCGCGTTCTGAAGGAAAGCAATCACCGCCAGTCTATG2300.22379636476861403No Hit
CATAGATCACCTACACAGACAGCTTTCCACGGGGGCAGATTAACAGGTCA2220.21601214338535785No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT2180.2121200326937298No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA2160.2101739773479158No Hit
CATAGATCATGCAAAGAACACAGGCCCTTCAGCATGTTGAGATGAATAAT2090.20336278363756669No Hit
CATAGAGGGGCATGCTGGATAAATCTCGGCTCTCTCCAGAACCCACCATC2070.2014167282917526No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG2040.19849764527303157No Hit
CATAGATCACCCAGGTAATCACTAGGTACGGGGGCAGATTAACAGGTCAT2040.19849764527303157No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA2020.1965515899272175No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA1990.19363250690849648No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT1970.19168645156268244No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACAGCATGTTGAGA1900.1848752578523333No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGGGATTATCAGTAGTGCTCA1790.17417195345035613No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCGCTACCGTACCTTTCAGC1780.1731989257774491No Hit
CATAGACCATTTGCCGCGTTCTGAAGACACTGACGACATGGTTCTACACA1770.17222589810454209No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC1720.167360759740007No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC1620.15763048301093682No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACGGGGGCAGATTAACAGGTC1550.15081928930058772No Hit
CATAGAAGATGGTCTGCTACACTGGTGGTTCCACACTCATGCAAAGCTGG1520.14790020628186665No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1510.14692717860895965No Hit
CATAGATGTGGCTATGCAGACTGAGTCTCTGCTACCGTAGGGATTATCAG1460.14206204024442454No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA1440.14011598489861052No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1380.1342778188611684No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGTAGATTAAGTGCAGCTATA1330.12941268049663332No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCAGGCAGATCAT1330.12941268049663332No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGCATGTTG1300.12649359747791228No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA1300.12649359747791228No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT1260.1226014867862842No Hit
CATAGATCAACAATGGATGAGCAAAAGGCAGATCATGAGGTCAGGTCTAT1260.1226014867862842No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG1260.1226014867862842No Hit
CATAGACTCAAGCAATCCTCCCACCTCTATGCTCTCTCCAGAACCCACCA1220.11870937609465614No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTGCTACCGTACCTTTCAGCATCT1210.1177363484217491No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT1200.11676332074884209No Hit
CATAGATCATGCAAAGAACACAGGCCTCTATGAGGCAGATCATGAGGTCA1170.11384423773012103No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGCAAAATTCCTTTATCCTGG1140.11092515471139998No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA1140.11092515471139998No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1130.10995212703849297No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1130.10995212703849297No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC1100.10703304401977191No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1070.10411396100105086No Hit
CATAGATCATGGGACTTCAGCATGGCCTTTCAGCATCTCTTTGGCTCTAT1060.10314093332814385No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT1060.10314093332814385No Hit
CATAGATGTGGCTATGCAGACTGAGTCTGGCTAGTCCGTCACCCCTAATC1050.10216790565523684No Hit
CNTAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC1050.10216790565523684No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCGGCTAGTCCGTCACCCCTAAT1050.10216790565523684No Hit
CATAGATGTGGCTATGCAGACTGAGTGCAGCTATATTGGAGGAAAAGTCT1040.1011948779823298No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1030.1002218503094228No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1030.1002218503094228No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCACACTGACGACATGGTTCTACACA1030.1002218503094228No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)