FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807385

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807385
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121297
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1379711.37455996438494No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG87107.180721699629834No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG70055.775080999530079No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC58594.8302925876155225No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG55874.606049613757966No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG44203.643948325185289No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA44113.636528520903237No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT28902.382581597236535No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT27412.259742615233683No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG24502.0198356101140176No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA23741.9571794850655828No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA21341.7593180375442097No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA20861.7197457480399352No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA18461.5218843005185618No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG15791.3017634401510343No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC15101.2448782739886393No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG14681.210252520672399No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA14571.201183870994336No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT12891.0626808577293752No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT11930.9835362787208257No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG9620.7930946354815042No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG9530.7856748311994526No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA9430.7774306042193954No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG8560.7057058294928976No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT8230.6784998804587088No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT7870.6488206633305028No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA7830.6455229725384799No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA7190.5927599198661138No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA7100.5853401155840623No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC7100.5853401155840623No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT7060.5820424247920394No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA6860.5655539708319249No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGATCATTGTTCAC6620.5457678260797876No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGACTGTGTGCTTGAACCAGA6540.5391724444957419No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC6090.5020734230854844No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT5850.48228727833334706No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA5610.46250113358120976No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC5240.431997493754998No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA5140.42375326677494085No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG4770.39324962694872917No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT4550.37511232759260327No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4200.34625753316240304No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA4130.340486574276363No Hit
CATAGAGTCCAACTATTCCAGCACCAAGGGGTAAGGCGTACTGGTCTATG4000.3297690792022886No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC3990.32894465650428284No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3630.2992654393760769No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGTTTCCCCACTCAAAT3340.275357181133911No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGTGGAAGGGTAAGAGAGGG3260.26876179954986523No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG3010.24815123209972217No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTCTGACGCTATACCACACTAC2650.2184720149715162No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2590.21352547878348188No Hit
CATAGATCCACGTGAGAATAAAGCATACACACTGACGACATGGTTCTACA2370.19538817942735598No Hit
CATAGACCTCCGACAGTTTTTATGCACTACACATAGATGTCTGCCTCTAA2360.19456375672935028No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGCATCTGGTGAGGGCCTTTG2350.19373933403134455No Hit
CATAGAGAAGACTCCCTCAACCCACCTTTCCACGCTGTCCTTCTCTGAAT2200.18137299356125872No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGACGACATGGTTCTACACATAGAG2150.17725088007123013No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2110.17395318927920725No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGGGTGGAAGGGTAAGAGAG2090.1723043438831958No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGACATGGTTCTACA2060.1698310757891786No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT2060.1698310757891786No Hit
CATAGAAATGATGCTGAAGGGCCTGATGCTGAAGTGATGGGCTAGATCTA1910.1574647353190928No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGCCCTCTCTGCTGTTCCT1810.1492205083390356No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATCATCAGGAACCA1810.1492205083390356No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1790.14757166294302415No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG1770.1459228175470127No Hit
CATAGATCACGTAGAAACTGGAGAGGCACTGACGACATGGTTCTACACAT1720.14180070405698408No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1710.14097628135897838No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1700.14015185866097266No Hit
CATAGAAATGATGCTGAAGGGCCTGCGACATGGTTCTACACATAGAAATG1600.13190763168091543No Hit
CATAGATGGCCAAGATACGAGCACATGCCTGGGGAATGGAGACAGCCGCT1580.130258786284904No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1570.12943436358689828No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTCTCCCAAGTATTAGAGCAAGT1550.12778551819088682No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGGGTGGAAGGGTAAGAGAGGGT1550.12778551819088682No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1490.1228389820028525No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA1480.12201455930484677No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTCTGCTACCGTCTGTCA1460.12036571390883534No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1450.11954129121082961No Hit
CATAGAAATGATGCTGAAGGGCCTGGAAATGATGCTGAAGTGATGGGCTA1450.11954129121082961No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA1450.11954129121082961No Hit
CATAGAAATGATGCTGAAGGGCCTGAATGATGCTGAAGTGATGGGCTAGA1420.11706802311681244No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCAAGTAATAACCAGGCC1390.11459475502279529No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG1330.10964821883476096No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1290.10635052804273808No Hit
CATAGACGGATTATTCTCTCCATGGTCTGCCCTCTCTGCTGTTCCTTCTA1280.10552610534473235No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTAGAACACTGTGTGCTT1260.10387725994872091No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)