FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807394

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807394
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100483
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG93979.351830657922235No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT78987.860036025994447No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG69106.8767851278325685No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT65426.510554024063772No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT40163.9966959585203465No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT38843.8653304539076263No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT27032.6900072649104825No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT26132.6004398754018094No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT25592.5466994416966053No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT25502.537742702745738No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT22622.2511270563179844No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG22132.2023625886965954No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT16111.6032562722052488No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG14151.4081984017196938No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT14041.3972512763353004No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC13861.379337798433566No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG13471.3405252629798077No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT12911.2847944428410776No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAAGCAGCAAACAATTTCAG10951.0897365723555228No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT10891.0837654130549446No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG9850.9802653185115892No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT9540.949414328791935No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG9140.9096066001214136No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT8700.8658180985838401No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG6810.6777265806156265No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT6640.6608082959306549No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC6520.6488659773294986No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6320.6289621129942379No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC6230.6200053740433705No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC6230.6200053740433705No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT5890.5861688046734274No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT5800.5772120657225601No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT5700.5672601335549297No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT5640.5612889742543514No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5250.5224764388005931No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4910.48863986943064996No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT4470.44485136789307644No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4340.43191385607515703No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC4260.4239523103410527No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT4170.4149955713901854No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA3900.38812535453758346No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA3600.35826955803469246No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3500.3483176258670621No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC3350.3333897276156166No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC2930.2915916125115691No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT2890.28761083964451695No Hit
CATAGACAATTTCAGTGCGGCCGATGCACAGGACATTGGGGAATTCTATG2630.26173581600867807No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT2590.25775504314162595No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG2570.2557646567080999No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC2410.2398415652398913No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTAGAATCTTGAACTCAGGAGTCT2390.23785117880636525No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGCAGCAAACAATTTCAGAAAG2290.2278992466387349No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG2280.22690405342197187No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT2060.2050098026531851No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC1970.1960530637023178No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTCTCCCTCTCTCACACATC1910.1900819044017396No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG1900.18908671118497655No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT1880.1870963247514505No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT1880.1870963247514505No Hit
CATAGAACTGTCCCCTACTTTTCACCAGGGCTGCATGGTGACTTTTCTAT1820.1811251654508723No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC1750.17415881293353105No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG1720.17117323328324194No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCTCCCTCTCTCACACATCTAT1680.1671924604161898No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1640.16321168754913767No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGTGACACCAAAAGCAC1600.15923091468208553No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT1580.15724052824855947No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGCATTCTTTCTCCAGACCTTCA1560.1552501418150334No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT1510.1502741757312182No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1450.14430301643064003No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1450.14430301643064003No Hit
CATAGAGAAGCCAGGGAACAAAGTGGATCTCAGAGTTAGCTTGCCTCTAT1390.1383318571300618No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA1370.13634147069653574No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1300.12937511817919448No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA1260.12539434531214236No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT1260.12539434531214236No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC1210.12041837922832717No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTAGATGTGGTTGCATGGGGGTCT1170.11643760636127504No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT1130.11245683349422289No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGTTTGCTATTACGAGGA1100.10947125384393379No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)