FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807398

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807398
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91574
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1538816.803896302443924No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT48125.254766636818311No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG44694.880206172057571No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT44224.828881560268199No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA43534.753532662109333No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA24062.6273833184091555No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT17511.9121147924083255No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA16321.7821652434097015No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA15931.73957673575469No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA13111.431629065018455No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA11001.2012143184746762No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT10861.185926136239544No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9661.0548845742241246No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT9411.0275842488042457No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC8750.9555113896957651No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8680.9478672985781991No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8480.9260270382422959No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACTCTGTTTACTCGGAGATTT8340.9107388560071636No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8190.8943586607552363No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT8080.8823465175704894No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC7330.8004455413108523No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG7080.7731452158909734No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC6980.7622250857230218No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG6230.6803241094633848No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6220.6792320964465897No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG5950.6497477449931203No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5920.6464717059427348No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT5820.6355515757747833No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT5620.61371131543888No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTCTGTTTACTCGGAGATTT4760.5197981959944963No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC4680.511062091860135No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATAGGAAACATTGGAAAGATG4640.5066940397929544No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4350.4750256623058947No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT4270.4662895581715334No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC4140.45209338895319634No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3880.4237010505165222No Hit
CATAGAACCAACCTCTCTATCTCCGTAGAGGAGAATGATATTGTTGCAGA3870.422609037499727No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT3850.4204250114661367No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3740.40841286828138995No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG3530.3854805949286915No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT3510.3832965688951012No Hit
CATAGAGGCACAGGGATAATGAGGGAGACTCTGTTTACTCGGAGATTTGA3410.3723764387271496No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTCTGTTTACTCGGAGA3350.3658243606263787No Hit
CATAGATCACCAGATGCCAGTTGTGCTAGCACTATTCTCTGGCCCGTCTA3320.36254832157599315No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT3270.3570882564920174No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3250.35490423045842706No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACCCCAGGTAGCAAAACAGAG3230.3527202044248367No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3160.3450761133072706No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG3030.3308799440889335No Hit
CATAGAGGCACAGGGATAATGAGGGAGTACGATAGCGAGAAGAGTGGAGG2980.3254198790049577No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2740.29921156660187387No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2700.29484351453469326No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACTCTGTTTACTCGGAGATTTGAC2660.2904754624675126No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG2650.2893834494507174No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT2620.286107410400332No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2610.2850153973835368No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2570.28064734531635616No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2490.2719112411819949No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA2460.2686352021316094No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC2460.2686352021316094No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2430.2653591630812239No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACAGGGCAGAGAGTGTGTT2370.25880708498045296No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT2330.25443903291327236No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCCAGGTAGCAAAACAGAGTCTAT2320.2533470198964772No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGAAGTGTATTAATTAT2300.2511629938628869No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2290.2500709808460917No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAAGTGTATTAATTA2260.24679494179570619No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGATGGGAAAGGTATGTGGCAC2240.24461091576211588No Hit
CATAGATCACCAGATGCCAGTTGTGCCTCTAGCCAAATTCCTTACCGATC2150.23478279861095944No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT2060.224954681459803No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT2020.22058662939262236No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTGAGGTCACTGACAGGTCTTAAAG1940.2118505252582611No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1850.20202240810710462No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA1720.18782623888876754No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTGGTCTCATAGAGGAGAATGATAT1650.18018214777120145No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1640.17909013475440627No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC1620.17690610872081594No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1590.1736300696704305No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCCCCAGAGGAGAATGATATTGTT1560.17035403062004498No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1550.16926201760324985No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT1520.16598597855286434No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1470.16052591346888853No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTCCTTCCACTACCCACCTGCCT1450.15834188743529823No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACGGTGCAATATGGGCTGGGTG1450.15834188743529823No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG1390.15178980933452726No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGGGGAAAAGGGATAGGAGG1380.1506977963177321No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGCTCCTTCTCACACAA1350.14742175726734663No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGGGGAAAAGGGATAGGA1300.14196169218337082No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1220.13322558804900955No Hit
CATAGAGGCACGATCTTGTTTCACTGTGGTCTCATAGGGCACTGAGACCA1180.1288575359818289No Hit
CATAGAGTCCTTCCCTCTCACACATGTGGCCCAGTGATGGGCTACTGGGT1150.12558149693144344No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCATAGGGCACTGAGACCACATCTA1150.12558149693144344No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1140.12448948391464826No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTGCA1110.12121344486426278No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAATATGGGCTGGGTGATCTATGTG1110.12121344486426278No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT1090.11902941883067246No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC1070.11684539279708213No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGATAGCGAGAAGAGTGGAG1050.11466136676349181No Hit
CATAGAAGTACCATCAGAGTGAACAGGCACTCTGTTTACTCGGAGATTTG1010.11029331469631118No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGAGGAATCTTTGGGAGGCTATTA1000.10920130167951603No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGGGAAAAGGGATAGGAGG960.1048332496123354No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA940.10264922357874505No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATGTCGTCAGTGTAGGAAACATT920.10046519754515473No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT920.10046519754515473No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)