FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807413

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807413
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113549
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA53854.742445992479018No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG40763.589639715012902No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA38903.4258337810108412No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA32812.889501448713771No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT28122.4764639054505104No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT25202.2193062026085655No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA24942.196408598930858No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA24742.178795057640314No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG23602.0783978722842122No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA22641.9938528740896002No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA21831.922518031862896No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC21761.9163532924112059No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA20021.7631154831834714No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT15591.372975543597918No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC15561.3703335124043365No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG14831.3060440866938503No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG14491.276101066499925No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG12871.1334313820465174No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT12801.1272666425948268No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC12791.1263859655302997No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG12751.1228632572721908No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG12401.0920395600137385No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA10700.9423244590441131No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT10410.916784824172824No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA10320.9088587305920792No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG10070.8868418039788989No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC9710.8551374296559194No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT9080.7996547745907053No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC9060.7978934204616509No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT8290.7300812864930559No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCCTGTTCACTCTGATGGTA7880.6939735268474403No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA7560.6657918607825697No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA7330.6455362882984438No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7250.6384908717822262No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAACTTAGCAACCTGT7080.6235193616852637No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC7070.6226386846207365No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC6230.548661811200451No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT6060.5336903011034884No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGACCAAAGCTAGAAACTCCCAT5680.5002245726514545No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5660.49846321852240005No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGTAGAGACAGGGTTTCACTCTA5380.4738042607156382No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGAGGACACTTTGGACTCTG5330.4694008753930021No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT5060.44562259465076753No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT4790.4218443139085329No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAACAGTGAAACAAGATCGTGC4650.40951483500515196No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCAGGACACTTTGGACTC4560.40158874142440704No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT4320.3804524918757541No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACATGGCTCACACC4270.376049106553118No Hit
CATAGATGCTTCTGATATGTTGCCGTTGGTTCTACACATAGATGCTCAGA3950.34786744048824736No Hit
CATAGACCCCATGTGCAGTGTAAGCTTAGAGAACAGCTAAAAATCTTGGA3850.3390606698429753No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTTTCCTCAGTTCTTTTTCTAT3660.32232780561695834No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGCTCACACCTATAATCCCATC3580.3152823891007407No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGACAGCTAGGGTG3580.3152823891007407No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCAGATCCTTGTCAACTCTT3520.3099983267135774No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT3520.3099983267135774No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACTGACGACATGGTT3480.30647561845546856No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACACTGACGACATGGCTCA3440.3029529101973597No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT3430.3020722331328325No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGCTCACACCT3380.2976688478101965No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGCAGCAACAAAAGTCAC3310.291504108358506No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG3310.291504108358506No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACTGACGACATGGCTCACACC3250.28622004597134276No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG3230.28445869184228834No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG3210.2826973377132339No Hit
CATAGAAGGAGCTGGACTGGATGGACGCCTGTTCACTCTGATGGTACTTC3110.27389056706796183No Hit
CATAGAGGATCCCCTGACATTTTGGTTGTACACATAGAGAACAGCTAAAA3110.27389056706796183No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACTGACGACATGGCTCAC3090.2721292129389074No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC3090.2721292129389074No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG3080.2712485358743802No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCCTGGCTCACACCTATAATCC3070.27036785880985303No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGTATGGTGGAGGGCT3050.2686065046807986No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCAGCAACAAAAGTCACT2980.2624417652291081No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC2980.2624417652291081No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACACTGACGACATGGCTCACACCT2970.2615610881645809No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2960.26068041110005374No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCATAGACCAAAGCTAGAAACT2890.25451567164836325No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG2760.24306686980950956No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA2760.24306686980950956No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2750.24218619274498235No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2670.2351407762287647No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTGACGACATGGCTCACACCTATA2670.2351407762287647No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACATAGAACAGCTAA2650.23337942209971027No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC2600.22897603677707423No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2600.22897603677707423No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT2530.22281129732538377No Hit
CATAGACCCCATGTGCAGTGTAAGCTATGGCTCACACCTATAATCCCATC2510.22104994319632937No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC2470.21752723493822052No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCGCAAACTAACACAGAAA2420.21312384961558445No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG2210.19462963126051308No Hit
CATAGAATACAACACACTCTCTGCCCTGCACACTCTCAGTTGTGTGTGTG2170.19110692300240423No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2150.18934556887334983No Hit
CATAGAACATCTACAGAACTCTCTACCCAAGGACACTTTGGACTCTGCCT2140.18846489180882262No Hit
CATAGAAGGAGCTGGACTGGATGGACTGACGACATGGCTCACACCTATAA2070.18230015235713215No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA2050.18053879822807775No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG2040.17965812116355054No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCTACACATAGAGAACAGCTAAAA1980.1743740587763873No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGTACGGAGATAGAGA1950.17173202758280567No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1880.1655672881311152No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA1880.1655672881311152No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTATCCCTGTGCCTCTTGTAGAAGG1870.164686611066588No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT1810.15940254867942474No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT1800.15852187161489753No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGCTCACACCTATAATCCCAT1800.15852187161489753No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1770.15587984042131592No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1770.15587984042131592No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACGACATGGCTCACACCTAT1760.1549991633567887No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGCTCACAC1760.1549991633567887No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1760.1549991633567887No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1720.15147645509867985No Hit
CATAGATGTGCCACATACCTTTCCCATCTGAGACCAAAGCTAGAAACTCC1710.15059577803415264No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1670.1470730697760438No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA1620.14266968445340777No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACATGGCTCACACCTATAATC1610.14178900738888056No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCAAGTAGAATTTGCAAATACAGA1560.13738562206624452No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA1550.1365049450017173No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1550.1365049450017173No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACTGACGACATGGCTCACAC1540.1356242679371901No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTGGTCTCATAGAGGCAC1510.13298223674360848No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTTGTAGAA1500.13210155967908127No Hit
CATAGATGGAAATTTTTGGCCAGGCGACACTGACGACATGGCTCACACCT1470.12945952848549966No Hit
CATAGATGTGCCACATACCTTTCCCATACACTGACGACATGGTTCTACAC1460.12857885142097245No Hit
CATAGATGTGGTCTCAGTGCCCTATGTGTAGCTCCCTCATTATCCCTGTG1400.1232947890338092No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCACTGACGACATGGCTCACACCT1290.1136073413240099No Hit
CATAGATCACCCAGCCCATATTGCACACACTGACGACATGGCTCACACCT1280.1127266642594827No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA1260.11096531013042828No Hit
CATAGATCACCCAGCCCATATTGCACCGTACCTCTAACTTCATAGCACAT1210.10656192480779222No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGGGAGAGG1190.1048005706787378No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGTTCACTCTGATGGTACTTCTATG1150.10127786242062897No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)