FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113549
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT52824.6517362548327155No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG40683.5825942984966845No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA38023.348334199332447No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA32142.830496085390448No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT26932.371663334771773No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT24802.184079120027477No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT24542.1611815163497696No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT23962.110102246607192No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG22922.0185118318963617No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA22401.972716624540947No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA21211.867916053862209No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA21201.8670353767976822No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA19641.7296497547314376No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT15221.3403904922104113No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG14671.291953253661415No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG14191.2496807545641089No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC13001.144880183885371No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG12441.0955622682718473No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT12221.0761873728522489No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC12221.0761873728522489No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC12211.0753066957877215No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA10430.9185461783018785No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT10200.8982906058177528No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT10130.8921258663660623No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG9800.8630635232366642No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA9360.8243137323974671No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG8890.7829219103646885No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC8800.7749958167839435No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT8590.7565015984288721No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8320.7327233176866375No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGATAGCGAGAAGAGTGGAG7530.6631498295889879No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT7380.64993967362108No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA7230.6367295176531718No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7070.6226386846207365No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT6990.6155932681045188No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTCATAGAGGAGAATGATATTGT6800.5988604038785017No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG6040.5319289469744339No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT5700.5019859267805089No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGCAACATATCAGAAGCAT5480.48261103136091027No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCAGTGTCCCCAGGTAGCAAAACAG5300.46675884419942054No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5280.4649974900703661No Hit
CATAGAGTGAAACCCTGTCTCTACCAACCAAAATGTCAGGGGATCCTCTA5150.4535486882315124No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT5040.4438612405217131No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT4690.4130375432632608No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGACTCTGTTTACTCGGAGATTTGA4450.3919012937146078No Hit
CATAGAGGCACGATCTTGTTTCACTGTTACGATAGCGAGAAGAGTGGAGG4430.3901399395855534No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTCTTCAGCTC4130.3637196276497371No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGAAGCAGAGGT4000.3522708258108834No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCAACGGCAAC3910.3443447322301385No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAAGCTTACACTGCACATGG3880.3417027010365569No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT3730.3284925450686488No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT3560.31352103497168626No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC3560.31352103497168626No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGAATGATATTGTTGCAGA3400.29943020193925085No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT3330.2932654624875604No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGCTTACACTG3310.291504108358506No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG3290.2897427542294516No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCTATGAGAAGTGTATTAA3280.2888620771649244No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTATATCTAGG3270.2879814001003972No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAAGTGTATTAATTATCTATGGC3250.28622004597134276No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTACAACCAAAATGT3160.2782939523905979No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG3110.27389056706796183No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAACCAAAATGT3090.2721292129389074No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG3080.2712485358743802No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGTAGCAGGAAACATTGGAAA3050.2686065046807986No Hit
CATAGAAGTACCATCAGAGTGAACAGGCGTCCATCCAGTCCAGCTCCTTC3020.26596447348721697No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGAGGAAACATTGGAAAGATGGG2980.2624417652291081No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2970.2615610881645809No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCTTGCTCCTTC2960.26068041110005374No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCTGTTTACTCG2920.2571577028419449No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT2920.2571577028419449No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGGAATCTTTGGGAGGCTA2880.25363499458383604No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2810.2474702551321456No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAGGAGAATGATATTGTTGCAGA2790.24570890100309117No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT2730.24042483861592795No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG2710.23866348448687352No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATGTCGTCAGTGTAGAA2680.23602145329329188No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC2650.23337942209971027No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGAGGAGGAGCTGACT2650.23337942209971027No Hit
CATAGATGGGATTATAGGTGTGAGCCATAGCTTACACTGCACATGGGGTC2550.2245726514544382No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2540.22369197438991098No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGTGTATTAATT2530.22281129732538377No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC2470.21752723493822052No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2450.21576588080916606No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG2440.21488520374463885No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTCATAGGGCACTGAGACCACAT2440.21488520374463885No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2300.20255572484125794No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCGGTCTGTTTACTCGGAGA2290.20167504777673073No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2210.19462963126051308No Hit
CATAGACCACACACACAACTGAGAGTGTGCAGGGCAGAGAGTGTGTTGTA2130.1875842147442954No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA2100.1849421835507138No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGGGTAGAGAGTTCTGTAGATGTT2040.17965812116355054No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA2040.17965812116355054No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCAGAGACTTGGTCTCATAGAGCA1990.1752547358409145No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1970.17349338171186007No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC1920.16908999638922403No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTCCATCCAGTCCAG1880.1655672881311152No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAAGAAGTGTATTAAT1870.164686611066588No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGATAAGGAGGAGCTGACTT1840.16204457987300638No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGCATTCTCTCAGGG1830.16116390280847917No Hit
CATAGAACCAACCTCTCTATCTCCGTACGGTAGCAGGAAACATTGGAAAG1820.16028322574395196No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1790.15764119455037034No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCTGTTTACTCGGAGATT1770.15587984042131592No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1730.1523571321632071No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGAAACATTGGAAAGATGGGGAT1730.1523571321632071No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT1720.15147645509867985No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1700.14971510096962543No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCAGATGGGAAAGGTATGTGGCA1670.1470730697760438No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT1650.1453117156469894No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1640.1444310385824622No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCAGGGCAGAGA1630.143550361517935No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT1600.14090833032435335No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1580.13914697619529895No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTAGGAAACATTGGAAAGATGG1560.13738562206624452No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACTTGGTCACTGACAGGT1540.1356242679371901No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTCTGTTTACTCGGA1520.1338629138081357No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT1520.1338629138081357No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAGACTTGGTCTCATAGAGGAGA1500.13210155967908127No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA1500.13210155967908127No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGTTTCACTGAGCTGAG1470.12945952848549966No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCGCCTGGCCAA1430.12593682022739083No Hit
CATAGAGGCACAGGGATAATGAGGGAGCTACACATAGGGCACTGAGACCA1400.1232947890338092No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTATGAGACCAAGAAG1340.11801072664664594No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1260.11096531013042828No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTGCAATATGG1250.11008463306590108No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1240.10920395600137386No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGGATAGCGAGAAG1210.10656192480779222No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGTGCAATATGGGCTGG1200.10568124774326501No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA1190.1048005706787378No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTAGAACCATGTCGTCAGTGTAT1190.1048005706787378No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTTGGTCTCATAGAGGAGAATGAT1170.10303921654968339No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTAGATGGATCATCTATGTGT1170.10303921654968339No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)