FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807421

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807421
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42541
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC470411.05756799323006No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC35298.295526668390494No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA26416.208128628852166No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA22975.399496955877859No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT20144.734256364448415No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT19954.689593568557392No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA15703.69055734467925No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA14033.29799487553184No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG10892.55988340659599No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG9992.3483227944806186No Hit
CATAGACACCATGCCTGGCTAATTTTACACTGACTGATACAGGAAGGCCT9752.2919066312498533No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG9612.2589972026985734No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC8171.9205002233139794No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT8041.8899414682306481No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGACAGCCGCTCACCTCTATGAG6541.537340448038363No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG6211.4597682235960603No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA4971.168284713570438No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGGAGACAGCCGCTCACCTCTAT3930.9238146729037869No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAC3470.8156836933781528No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT3470.8156836933781528No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTACCTGATTGGCCATTT3330.782774264826873No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTATCCCCAGAAATGTTAGCA2960.695799346512776No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2810.6605392444935474No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA2720.6393831832820103No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGGTTCTACACAAAGTCACGAA2700.6346818363461132No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC2670.6276298159422674No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC2620.6158764486025246No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA2570.6041230812627818No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG1740.40901718342305066No Hit
CATAGATCATGGGACTTCAGCATGGCCTTCCTAACCATGGGCATATCTAT1660.3902117956794621No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGTTCTACACATAGAGCTGCCTT1580.3714064079358736No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1540.3620037140640794No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG1530.3596530405961308No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTCACAATCCCCAGAAATGTTA1490.3502503467243365No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGTGTGCTTCTTTCAAAAGTCTGG1440.33849697938459367No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAACCTGATTGGCCATTT1430.3361463059166451No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATATCCC1420.33379563244869653No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1400.3290942855127994No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTACACTGACTGATACAGG1380.32439293857690227No Hit
CATAGATGTATACAAGCTGTCACAGACAACAATGGGCAAGCAATGACAGT1370.32204226510895373No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTACGGTACACTGATCTATCC1330.31263957123715946No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTAGCAGAATTACCTCTGGA1060.24917138760254814No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCGTCATGTATCCCCAGAAAT1030.24211936719870245No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG950.2233139794551139No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC910.21391128558331962No Hit
CATAGATCCTCTCATTGTCCAGTTTGGACACTGACTGATACAGGAAGGCC890.20920993864742252No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGACGACATGGTTCTACACA860.2021579182435768No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG850.19980724477562822No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC820.19275522437178252No Hit
CATAGACAGGGAGGCGTATAAGTGTTGATTGTGTTATTGGTAAGGGTCTA760.1786511835640911No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT700.1645471427563997No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA690.16219646928845113No Hit
CATAGATCATGGGACTTCAGCATGGCTTCCTAACCATGGGCATATCTATG660.15514444888460543No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA640.1504431019487083No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGACTCTGTTATTCAAAGGTTTT640.1504431019487083No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG640.1504431019487083No Hit
CATAGATGTCCATCATGTGGAAGCTGCTTCCTTCTGCTGGCTATTCTATG620.14574175501281117No Hit
CTGACTGATACAGGAAGGCCTTTCTATGAGACCAAGTCTCTGCTACCGTA610.1433910815448626No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA590.13868973460896547No Hit
CATAGATCATGGGACTTCAGCATGGCTACACTGACGACATGGTTCTACAC580.1363390611410169No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATCCCCAGAAATGTTAGCAT550.1292870407371712No Hit
CATACTCAGGAGGCTGAGGCAGTCTATGAGACCAAGTCTCTGCTACCGTA510.11988434686537693No Hit
CAAAGTCACGAAAGTGGGTCTATGAGACCAAGTCTCTGCTACCGTACACT500.11753367339742836No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGCTGGAGACAGCCGCTCACCT500.11753367339742836No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGATATCCCCAGAAATGTTAGCA490.1151829999294798No Hit
CATAGATCATGGGACTTCAGCATGGGACTTCAGCATGGAGACAGCCGCTC490.1151829999294798No Hit
CATAGATCATGGGACTTCAGCATGGCGACAGCCGCTCACCTCTATGAGAC490.1151829999294798No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT470.11048165299358266No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC470.11048165299358266No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA470.11048165299358266No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA470.11048165299358266No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT450.10578030605768553No Hit
CATAGATGTCCATCATGTGGAAGCTGCACAGATCATTTAAGCTCAATCTA440.10342963258973695No Hit
CATAGATCATGGGACTTCAGCATGGCTATTCTGTGAGACCAAGTCTCTGC440.10342963258973695No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGACATGGTTCTACACTG430.1010789591217884No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)