FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162243
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA146018.999463767311996No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC102566.321382124344348No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC93575.767275013405817No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC85555.27295476538279No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT61853.8121829601277093No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA46682.8771657328821583No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA41322.54679708831814No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG40722.509815523628138No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG37302.2990206048951265No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT35612.1948558643516205No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG34472.124590891440617No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC34462.123974532029117No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA31981.9711173979771086No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT27941.7221081957310949No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA25621.5791128122630869No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT23381.4410483040870792No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC23041.420092084096078No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTCAGACATGTTTCCTAGTTT19011.1716992412615643No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT16371.0089803566255555No Hit
CATAGACTTGATGCCCAGGAAACCTCGGCAGTGAGGTACAGAAATCTATG15920.981244183108054No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG15330.9448789778295519No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT13090.8068144696535443No Hit
CATAGAGCTATCAGTATACTCCCACCATGATCTGAGCAAGGATAGCCCTC11900.7334676996850403No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT11030.6798444308845374No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC10460.6447119444290355No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGATCTGAGCAAGGATA10180.6274538809070345No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG9480.5843087221020321No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGTACGAGGCCTGAGATTGCTGCTA9420.5806105656330319No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATCGTCCGCAGTTGTTCTTTC8340.5140437491910282No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT7930.4887730133195269No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTAGAGAGGTCTTGG7870.48507485685052665No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA7850.4838421380275266No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT7580.46720043391702565No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC7440.4585714021560252No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTGGGTGCCTG7230.4456278545145245No Hit
CATAGATCATGGGACTTCAGCATGGCTGCTTTTCTCTTCTTGGCATCTAT6490.400017258063522No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC6310.3889227886565214No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGAGACAGCCGCTCAC6310.3889227886565214No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT6170.3802937568955209No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC5680.3500921457320193No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTAGCTTGGGTGAC5570.34331219220551884No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTAATAGGCAGTCTCAAACG5520.34023039514801867No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGAGGCCTGAGATTGCTGCTATCT5390.3322177227985183No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCACACTGACGACATGGTTCTAC5310.327286847506518No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC5260.3242050504490178No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTCAGACATGTTTCC5160.3180414563340175No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCATGAGGCCTGAGATTGC5100.3143432998650173No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC5020.30941242457301704No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC4870.30016703340051654No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG4840.2983179551660164No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCGGTGAGAGGCAGTCTCAAACG4770.2940034392855162No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACTGGGAGAGGC4760.29338707987401613No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGTGCTCATACAGAATTAGA4680.2884562045820159No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC4480.2761290163520152No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG4350.2681163440025147No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT4340.2674999845910147No Hit
CATAGACCACACCCAAACACCACGTAGTGTTACAACCAATGCTCTTTCAT4230.26072003106451436No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTAACACTGACGACATGGGCAA4140.25517279636101403No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTTCTAC4040.24900920224601367No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGGGAGAGGCTGTTTGAGATCT3910.24099652989651327No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA3900.24038017048501323No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC3700.22805298225501255No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA3660.22558754460901242No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT3640.22435482578601235No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTACATGGTGGGTGC3630.22373846637451228No Hit
CATAGAACAAGGCCAGAATTACCCTGCGACATGGTGGGTGCCTGATTGTT3560.21942395049401206No Hit
CATAGACTTGATGCCCAGGAAACCTCACTGACGACATGGTGGGTGCCTGA3540.218191231671012No Hit
CATAGACCCTTAGAGTTTCAGCCTCCACACTGACGACATGGTGGGTGCCT3540.218191231671012No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3490.21510943461351184No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3470.21387671579051176No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA3350.20648040285251137No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC3300.2033986057950112No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGTGTAGAATTAGCGGAGAGTGAGA3130.19292049579951062No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG3080.18983869874201045No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC3070.18922233933051041No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGGACATGGATGAAGCTGGA3040.1873732610960103No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2950.18182602639251No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGACATGGTGGGTGCCTGATTGTTC2790.17196427580850945No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACTGGGTGAGAA2760.17011519757400934No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCATGGTTCTACACATAGAGGGTGG2650.163335244047509No Hit
CATAGATCTGTGGCTCCCGATAAATGTCGTCAGTGTGATCTGAGCAAGGA2650.163335244047509No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA2610.16086980640150886No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT2570.1584043687555087No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT2530.15593893110950857No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT2530.15593893110950857No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG2520.15532257169800853No Hit
CATAGACCCTTAGAGTTTCAGCCTCCACACTGACGACATGGTGTTACAAC2410.14854261817150818No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATAGCAAAAGCCTGGGAGAGG2400.14792625876000812No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATGGGCAACAGA2370.14607718052550803No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA2250.1386808675875076No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTGGGCAA2230.13744814876450756No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG2190.13498271111850743No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC2170.13374999229550735No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG2140.13190091406100726No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCAGTCTCAAACGTTGTG2080.12820275759200706No Hit
CATAGATCTGTGGCTCCCGATAAATGTCGTCAGTGTCTGGGAGAGGCTGT2050.12635367935750696No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT1990.12265552288850674No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGCAGTCTCAAACGTTGTGTCTAT1950.12019008524250661No Hit
CATAGATCTGTGGCTCCCGATAAATGTACACTGACGACATGGTGGGTGCC1860.1146428505390063No Hit
CATAGAACAAGGCCAGAATTACCCTGACTGACGACATGGTGGGTGCCTGA1840.11341013171600622No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCTTGTGCTCATACAGAATTAG1840.11341013171600622No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT1810.11156105348150613No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCGCTACCGTCCAGCAGAATCAG1800.11094469407000611No Hit
CATAGAATGCAGGAGAATATACACAGCTTGGGTGACAGAGTGAGTCTATG1770.109095615835506No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGAGGTCTTGGCAGGCTTGTCT1740.10724653760100589No Hit
CATAGAGAAGAGAAGGCGACAATGGCCACACTGACGACATGGTTCTACAC1740.10724653760100589No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACCAAGTCTCTGCTACCG1650.1016993028975056No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGTTACAAC1630.10046658407450552No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)