FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162243
Sequences flagged as poor quality0
Sequence length150
%GC34

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT148929.178824356058504No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG116657.189832535147896No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG95505.886232379825324No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA86735.345685175939794No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT62843.873202541866213No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA46852.887643842877659No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT42472.617678420640644No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG42452.6164457018176437No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG38042.344631201346129No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT35542.1905413484711205No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG35182.168352409657119No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA34292.113496422033616No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT32472.00131900914061No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT27901.7196427580850948No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT26081.6074653451920884No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT23811.4675517587815807No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA23741.4632372429010805No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG19681.2129953218320668No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG17061.051509156019058No Hit
CATAGATTTCTGTACCTCACTGCCGAGGTTTCCTGGGCATCAAGTCTATG16251.0015840436875552No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG15210.9374826648915516No Hit
CATAGATCCCTGGCAAGAATTCCTCATGGTGGGAGTATACTGATAGCTCT12740.7852418902510433No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC11740.7236059491010398No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT11240.692787978526038No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA10420.6422465067830353No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG10160.6262211620840344No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAACCTGTGTATATTCTCCT10130.6243720838495344No Hit
CATAGATAGCAGCAATCTCAGGCCTCGTACACCAAAAGCACAAGGGAGAA9640.5941704726860327No Hit
CATAGAGGAAAGAACAACTGCGGACGATAGAGGCAAGGGTACTATTTTGA8570.528220015655529No Hit
CATAGACAAGCCTGCCAAGACCTCTCTACGGTAGCAGAGGCAAGGGTACT8180.5041819986070277No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA8140.5017165609610276No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA7990.49247116978852706No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG7810.4813767003815265No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG7560.4659677150940256No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT7520.4635022774480255No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATGCTGAAGTCCCATGATCTAT6520.4018663362980221No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC6310.3889227886565214No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAACCTGTGTATATTCTCCTGCA6300.38830642924502135No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT6200.382142835130021No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGTGTAGAACCATGTCGTC5970.36796656866552024No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC5930.36550113101952014No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG5860.36118661513901984No Hit
CATAGACACAACGTTTGAGACTGCCTATTAGTGCCATACCAAGAATAAGA5640.34762670808601914No Hit
CATAGACTCACTCTGTCACCCAAGCTACGGTAGCAGAAGCTTTGAGATTT5580.3439285516170189No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG5480.33776495750201857No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCCTCTTCTTCCTCCTCCTGTCT5340.32913592574101813No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACTATGGCTTAATGTT5240.32297233162601774No Hit
CATAGATAGCAGCAATCTCAGGCCTCATGCCCAGGAAAGTTGGAACCTAT5120.3155760186880174No Hit
CATAGACACAACGTTTGAGACTGCCTCTCACCGGAGACCCCATATCTACC4900.3020161116350166No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGTGTACCAAAAGCACAAG4860.29955067398901647No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA4820.29708523634301637No Hit
CATAGATCTCAAACAGCCTCTCCCAGTACGGTAGCAGAAGCTTTGAGATT4770.2940034392855162No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT4600.28352532929001556No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC4490.2767453757635152No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC4280.2638018281220145No Hit
CATAGATGAAAGAGCATTGGTTGTAACACTACGTGGTGTTTGGGTGTGGT4260.26256910929901445No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT4030.24839284283451366No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTTAGAAGCTTTGA4000.24654376460001357No Hit
CATAGATCTCAAACAGCCTCTCCCAGAGGCAAGGGTACTATTTTGATTCT3920.24161288930801328No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT3890.23976381107351316No Hit
CATAGAACAATCAGGCACCCACCATGTCGCAGGGTAATTCTGGCCTTGTT3770.23236749813551277No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3690.22743662284351254No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA3690.22743662284351254No Hit
CATAGAACAATCAGGCACCCACCATGTACGGTAGCAGAGGCAAGGGTACT3670.22620390402051244No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT3670.22620390402051244No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGAGGTTTCCTGGGCAT3650.22497118519751239No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGGAGGCTGAAACTC3550.21880759108251205No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT3360.20709676226401139No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGTGACACCGAAAAACAC3290.20278224638351117No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCCTGCATTCTATGTGTAGAACC3200.19723501168001084No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG3200.19723501168001084No Hit
CATAGATCCAGCTTCATCCATGTCCCCAGGAAAGTTGGAACCTATCAGTG3050.18798962050751034No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG3000.18490782345001017No Hit
CATAGACGGGAAGAGTAAGACCACCCTCTATGTGTAGAACCATGACCAAA2770.1707315569855094No Hit
CATAGAGCCATCATCATTTCTCACCCAGTACGGTAGCAGAAGCTTTGAGA2770.1707315569855094No Hit
CATAGAACAATCAGGCACCCACCATGTCTCCTCTTCTTCCTCCTCCTGTC2740.16888247875100929No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATGATCTATGTGTAGA2710.1670334005165092No Hit
CATAGAGGGCTATCCTTGCTCAGATCACACTGACGACATTTATCGGGAGC2630.1621025252245089No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC2590.15963708757850878No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT2550.15717164993250865No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT2540.1565552905210086No Hit
CATAGATCTCAAACAGCCTCTCCCAGGCTTTTGCTATAGAGGCAAGGGTA2450.1510080558175083No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACGGTAGCAGAAGCTTTGAGATT2420.1491589775830082No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCATGTCGTCAGTGTGGAGGCT2350.14484446170250795No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTTGGTCTCATAGAGAAGCTTTGA2320.14299538346800786No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2200.13559907053000744No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG2190.13498271111850743No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT2160.1331336328840073No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACCCCATATCTACCAAAGA2140.13190091406100726No Hit
CATAGAGAAGCTTTGAGATTTGTGTCTGTTCTATGTGTAGAACCATGTCG2110.13005183582650715No Hit
CATAGATCTCAAACAGCCTCTCCCAGACACTGACGACATTTATCGGGAGC2080.12820275759200706No Hit
CATAGACACAACGTTTGAGACTGCCTCCTCTTCTTCCTCCTCCTGTCTAT1960.12080644465400664No Hit
CATAGACAAGCCTGCCAAGACCTCTCTTCTCTATGTGTAGAACCATGTCG1940.11957372583100657No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACATTTATCGGGAG1920.1183410070080065No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTCAGGGTAATTCTGGCC1910.11772464759650647No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGACCCCATATCTA1840.11341013171600622No Hit
CATAGAACCAACCCTGATTCTGCTGGACGGTAGCGGAGACCCCATATCTA1820.11217741289300617No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC1820.11217741289300617No Hit
CATAGACTCACTCTGTCACCCAAGCTGTGTATATTCTCCTGCATTCTATG1780.10971197524700603No Hit
CATAGACAAGCCTGCCAAGACCTCTCCTCCGATGCTTATTACATTGTTCT1740.10724653760100589No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCATGTCGTCAGTGTGAGGTTT1710.1053974593665058No Hit
CATAGAGGTTTCCTGGGCATCAAGTCTATGTGTAGAACCATGTCGTCAGT1630.10046658407450552No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)