FastQCFastQC Report
Wed 8 May 2024
EGAF00005807431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences163345
Total Bases24.5 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1962912.016896752272798No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG106936.546267103370168No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG75924.6478312773577395No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA69324.2437785056169455No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC56383.4515901925372674No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC47022.878569898068505No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA45592.791025130858No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG41402.5345128409195263No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA27961.7117144693746367No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA25331.550705561847623No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC19391.1870580672809086No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA17911.096452294223882No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC16991.0401297866478925No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA16801.028497964431112No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG15570.9531972206066913No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA15430.9446264042364322No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAAGTGGCAG15100.9244237656493924No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC14800.9060577305702654No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC14560.8913649025069639No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG14540.8901405001683553No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA13310.8148397563439346No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT12090.7401512136888181No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA11750.7193363739324743No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA11610.7107655575622149No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT11360.6954605283296091No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA11050.6764822920811778No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG10330.6324038078912732No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT10230.6262817961982308No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGCCATGTCTTCTGTGTTTG9010.5515932535431143No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG8710.5332272184639872No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGGAAAGCAATCACCGCCAG7770.47568030854938936No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA7350.4499678594386115No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC7270.44507025008417767No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT7140.43711163488322263No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGACATGGTTCTAC6520.3991551623863602No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA6480.39670635770914325No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT6290.3850745354923628No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCATTTCCCCTCTCTCTGAATAACT6030.36915730509045275No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC5940.36364749456671464No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCACACTCATGCAAAGCTGGT5720.3501790688420215No Hit
CATAGATCATGGGACTTCAGCATGGCCATTGGAGACAGCCGCTCACCTCT5660.3465058618261961No Hit
CATAGACCCTTCTCCATGCCACATCATCTATGAGATGTCAGAGATAGCAC5650.34589366065689187No Hit
CATAGAGCTTCTGATCACTTTCGCCCACACTCATGCAAAGCTGGTCTATG5570.34099605130245797No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC5340.3269154244084606No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC5010.3067127858214209No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCACACATAGAGCCATGGGTCCTTTT4550.2785515320334262No Hit
CATAGATCATGGGACTTCAGCATGGCATTGGAGACAGCCGCTCACCTCTA4540.277939330864122No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT4480.2742661238482966No Hit
CATAGAGCTTCTGATCACTTTCGCCCACACTGAGACATGGTTCTACACAT4300.26324650280082035No Hit
CATAGATCATGGGACTTCAGCATGGCGATGTTTGCAGATTTGGACCTGCG4270.26140989929290764No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGTTTTTCC4080.24977807707612723No Hit
CATAGACCATTTGCCGCGTTCTGAAGGAGGGAAGGAAGGGCAAACTCTAT4040.24732927239891028No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG4020.24610487006030182No Hit
CATAGAGGGGCATGCTGGATAAATCTCATGGTTCTTATAGCCAGTGTCTC3970.24304386421378066No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA3930.2405950595365637No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA3810.2332486455049129No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCAAGAATGAGGAGAGTACTACTTTC3610.22100462211882824No Hit
CATAGAAGATCCCATAGCAGCTTTGCTAATAGTTTTTCCAAATATAAGAT3590.21978021978021978No Hit
CATAGATCAACAATGGATGAGCAAAAGGCAGATCATGAGGTCAGGTCTAT3540.2167192139336986No Hit
CATAGACACCTGGATCCTGTGTTGTCTTAGGTAGAGGAGTTTCAAACATC3500.2142704092564817No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT3500.2142704092564817No Hit
CATAGACTCAAGCAATCCTCCCACCTACACTGCCATGTCTTCTGTGTTTG3400.20814839756343934No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAAGGAAAGC3390.20753619639413512No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA3340.20447519054761393No Hit
CATAGACTCAAGCAATCCTCCCACCTAGTTTTTCCAAATATAAGATCCCA3320.2032507882090055No Hit
CATAGATCATGGGACTTCAGCATGGCAACATAGATTAAGTGCAGCTATAT3320.2032507882090055No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC3190.19529217300805046No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG2930.17937494260614037No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGCAATCACCGCCA2890.17692613792892345No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA2870.175701735590315No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA2740.16774312038935993No Hit
CATAGACCCTTCTCCATGCCACATCATCCCATGGGTCCTTTTCACATCAT2680.16406991337353455No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAGCTATATTGGAGGAAAAGT2660.1628455110349261No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGATCATGAGGTCAGGTCTAT2620.16039670635770914No Hit
CATAGATCACCCAGGTAATCACTAGGTACCCAGGCAGATCATGAGGTCAG2590.15856010284979644No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT2580.1579479016804922No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGCAGGCAGATCATGAGGTCAGG2550.15611129817257952No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGGGTCCTTTTCACATCATCTATG2490.1524380911567541No Hit
CATAGACTCAAGCAATCCTCCCACCTCATGCCATGTCTTCTGTGTTTGGT2480.15182588998744986No Hit
CATAGACTCAAGCAATCCTCCCACCTCTATGAGACCAAGTCAGTTTTTCC2450.14998928647953716No Hit
CATAGATTAAGTGCAGCTATATTGGAGGAAAAGTCTATGAGACCAAGTCT2430.1487648841409287No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGGAAGGAAGGGCAAACT2430.1487648841409287No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT2410.14754048180232024No Hit
CATAGAGCTTCTGATCACTTTCGCCCTACGGGGGCAGATTAACAGGTCAT2370.14509167712510332No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCCACACTCATGCAAAG2340.14325507361719061No Hit
CATAGATGTGGCTATGCAGACTGAGTCTCTGCAGCATGTTGAGATGAATA2340.14325507361719061No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTATAGATTAAGTGCAGCTATAT2290.14019406777066942No Hit
CATAGAAGGAGGGGAAACTGAGGCCAATTTGTGCTGACTTCTCAAAGCTG2270.138969665432061No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG2260.13835746426275675No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA2240.1371330619241483No Hit
CATAGAGCTTCTGATCACTTTCGCCCATGGTTCTACACATAGAGCTTCTG2220.1359086595855398No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAACTAATAGTTTTTCCAAATA2200.13468425724693134No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2190.1340720560776271No Hit
CATAGAAGGAGGGGAAACTGAGGCCATCACAGCACTTTTGCATTTCTGCC2140.13101105023110596No Hit
CATAGACTCAAGCAATCCTCCCACCTACGGGGGCAGATTAACAGGTCATC2060.12611344087667206No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATAA2020.12366463619945514No Hit
CATAGAAGATGGTCTGCTACACTGGTAACTTGTCTCATAGAGGAGCACCC1940.11876702684502129No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGCG1890.11570602099850011No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTGACGACATGGTTCTACACAT1810.11080841164406623No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAAGTCTCTGCTACCGT1760.10774740579754508No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCATAGTTTTTCCAAATATAAG1750.10713520462824085No Hit
CATAGATCATGCAAAGAACACAGGCCCTGACGACATGGTTCTACACATAG1700.10407419878171967No Hit
CATAGAAGGAGGGGAAACTGAGGCCACTGACGACATGGTTCTACACATAG1690.10346199761241545No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAAGGGATTA1680.1028497964431112No Hit
CATAGATCATGCAAAGAACACAGGCCGATCATGCAAAGAACACAGGCAGA1650.10101319293519849No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)