FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807435

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807435
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20197
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA14197.025795910283705No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA13636.7485270089617275No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT13196.530672872208744No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT10675.2829628162598405No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG8734.322424122394415No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA7803.8619596969847008No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA5502.723176709412289No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC3981.9705896915383474No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG3791.8765163143041046No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC3781.871565083923355No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT3621.792345397831361No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCACAAGCAATGGGGAAAGGA3361.6636134079318712No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT3161.5645888003168789No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA3101.534881418032381No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA2911.4408080407981383No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2911.4408080407981383No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG2551.2625637470911522No Hit
CATAGACCTTTGGGTTCATATCATCTGGTCCTTTCCCTCACTCTCTCCAT2211.094221914145665No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT2161.0694657622419173No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA2141.0595633014804178No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC2111.044709610338169No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACTGATACAGGAAGGCCTT1970.9753923850076744No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGAGTTCAAAATGGTCAAACAGG1960.9704411546269248No Hit
CATAGAGCTGGCTTCCTAACTTCCAATCTAACAAGCAATGGGGAAAGGAT1950.9654899242461752No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT1800.8912214685349309No Hit
CATAGAGCTGGCTTCCTAACTTCCAACACTGACTGATACAGGAAGGCCTT1780.8813190077734318No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATAGAATCCTTTCCCTCACTCT1740.8615140862504332No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1690.8367579343466852No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGACGACATGGTTCTA1650.8169530128236867No Hit
CATAGAGCTGGCTTCCTAACTTCCAATCCTTTCCCTCACTCTCTCCATCT1470.7278308659701936No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA1460.722879635589444No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCACAAGCAATGGGGAAAGG1440.7129771748279448No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGTGTATGATCTATCCAGGAAT1360.6733673317819479No Hit
CATAGATGTATACAAGCTGTCACAGACAACAATGGGCAAGCAATGACAGT1350.6684161014011982No Hit
CATAGACAGGGAGGCGTATAAGTGATGTTCTACACATACTCAGGAGGCTG1310.6486111798781997No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1280.633757488735951No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT1170.5792939545477052No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTGGCTTGACTTTTCATCTAT1110.5495865722632074No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT1110.5495865722632074No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACCTTTCCCTCACTCTC1030.5099767292172105No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1020.5050254988364609No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1000.4951230380749616No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAACAATGGGCAAGCAATGACAGT900.44561073426746545No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT860.425805812744467No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA830.41095212160221817No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATCTGTTATTCAAAGGTTTT780.3861959696984701No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG730.361439817794722No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGTGTAGAAACAAGCAATGGGG720.3564885874139724No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTACACAAAGTCACGAAAGT700.3465861266524731No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG690.34163489627172355No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCTGTGCTTCTTTC650.32182997474872505No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA590.2921225924642274No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAATCT550.2723176709412289No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA530.26241521017972963No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCAATGGGGAAAGGATTCTATGAG490.2426102886567312No Hit
CATAGAGCCAAGGAAAGTTGAATGGACAAGCAATGGGGAAAGGATTCTAT470.23270782789523198No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT460.22775659751448235No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC450.22280536713373272No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT450.22280536713373272No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCCAATGGGCA440.21785413675298312No Hit
CATAGACAGGGAGGCGTATAAGTGATGACATGGTTCTACACATACTCAGG430.2129029063722335No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACACCTG400.19804921522998467No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGTATCCCCAGAAATG380.18814675446848542No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTGCTTCTTTCAAAAGTCTGGT370.18319552408773582No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA360.1782442937069862No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC360.1782442937069862No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACGACATGGTTCTACAC340.16834183294548696No Hit
CATAGAACTTCACAAGGGCTTTAGGGTACGGTAGCAGAATTACCTCTGGA340.16834183294548696No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCATGTGCTTCTTTCAAAAGTCTG340.16834183294548696No Hit
CATAAATGACCTTCTCTTCTGTCTCTTTCTATGAGACCAAGTCTCTGCTA340.16834183294548696No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC320.15843937218398774No Hit
CATAGACCTGGGCTTAGGGGCTACACTGACGACATGGTTCTACACATAGA310.15348814180323808No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA310.15348814180323808No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT300.14853691142248848No Hit
CATAGATGTCCATCATGTGGAAGCTGCTTCCTTCTGCTGGCTATTCTATG290.14358568104173886No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATGAGAC270.13368322028023966No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGGCTACACATGGCTATGCAA270.13368322028023966No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGGAAAGGACAAGCAATGG260.12873198989949003No Hit
CATAGAGCTGGCTTCCTAACTTCCAACTGCCTTCCTAACCATGGGCATAT250.1237807595187404No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)