FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807436

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807436
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20197
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA14597.223845125513691No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA13296.58018517601624No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT12856.362331039263257No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG10785.337426350448086No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT10535.213645590929346No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA8694.302619200871416No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG3891.9260286181116006No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA3891.9260286181116006No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT3731.8468089320196068No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC3651.80719908897361No Hit
CATAGAATCCTTTCCCCATTGCTTGTGACATGGAAGTACACAAAAAGGGC3401.6834183294548697No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT3151.5596375699361291No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT3001.4853691142248848No Hit
CATAGACATGCTAACATTTCTGGGGATAACATTACTGGGGACTGTGACTC2951.4606129623211368No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG2891.430905580036639No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCATGTGTAGA2621.2972223597563994No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT2541.2576125167104026No Hit
CATAGATGGAGAGAGTGAGGGAAAGGACCAGATGATATGAACCCAAAGGT2231.1041243749071645No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCATCACTTATACGCCTCCC2101.0397583799574193No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT2091.03480714957667No Hit
CATAGACCTCCTGTTTGACCATTTTGAACTCACTGGGGACTGTGACTCTG2021.0001485369114225No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTATGTGTAGAACCATGTCGTC2000.9902460761499232No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAAGGCTGGCAAAGTTCCAA1970.9753923850076744No Hit
CATAGAATCCTTTCCCCATTGCTTGTTAGATTGGAAGTTAGGAAGCCAGC1960.9704411546269248No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATACTGGGGACTGTGACTC1810.8961726989156805No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT1740.8615140862504332No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGGAAGTTAGGAAGCCAGC1650.8169530128236867No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTGGAAGTTAGGAAGCCAGCTCT1590.7872456305391891No Hit
CATAGAATCCTTTCCCCATTGCTTGTGGTCTCATAAATTCAACAGGCTTT1460.722879635589444No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG1430.7080259444471951No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAGAACCATGTCGTCAGTGT1330.658513640639699No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCATACACATAGACCAACTC1320.6535624102589493No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA1300.6436599494974501No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGTCTGTGACAGCTTGTATACAT1300.6436599494974501No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACATCACTTATACGCC1270.6288062583552013No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAACTCAGATGG1180.5842451849284548No Hit
CATAGATGGAGAGAGTGAGGGAAAGGTACGGGAGCAGGAATTAGACTCTT1130.5594890330247067No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAATAGAGCAGGAATTAGACTCT1130.5594890330247067No Hit
CATAGATGAAAAGTCAAGCCAGCACATCACTTATACGCCTCCCTGTCTAT1070.5297816507402089No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA980.4852205773134624No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG950.4703668861712135No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGAAGTTAGGAAGCCAGCT900.44561073426746545No Hit
CATAGACCAGACTTTTGAAAGAAGCACATGGAAGTACACAAAAAGGGCAT870.4307570431252166No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA820.40600089122146854No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA780.3861959696984701No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATAGAGCAGGAATTAGACTCTT760.37629350893697083No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTCTACACATAGACCAACTCAGAT730.361439817794722No Hit
CATAGACCCACTTTCGTGACTTTGTGTACGGAGCAGGAATTAGACTCTTG700.3465861266524731No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA680.3366836658909739No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA660.32678120512947467No Hit
CATAGACCAGACTTTTGAAAGAAGCACAGGTCTCATAGAGCAGGAATTAG620.30697628360647616No Hit
CATAGATGCATCAGCAACTCACAGATTTGGTCTCATAGATTGCATAGCCA610.3020250532257266No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT580.2871713620834777No Hit
CATAGACTTCCTTGCCCCCATTTATTGGTCTATGTGTAGAACCATGTCGT570.28222013170272814No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA530.26241521017972963No Hit
CATAGAATCCTTTCCCCATTGCTTGGAAGTTAGGAAGCCAGCTCTATGTG490.2426102886567312No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATTCAACTTTCCTTGGCTCTAT470.23270782789523198No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT460.22775659751448235No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG460.22775659751448235No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT450.22280536713373272No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCATCACTTA450.22280536713373272No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT420.2079516759914839No Hit
CATAGACTGTCATTGCTTGCCCATTGGACTGTCATTGCTTGCTCATTATT400.19804921522998467No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA380.18814675446848542No Hit
CATAGACATGCTAACATTTCTGGGGATACTAACATTACTGGGGACTGTGA380.18814675446848542No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTAGCAGAGACTTGGTCTCATAAA380.18814675446848542No Hit
CATAGACCAGACTTTTGAAAGAAGCACACTGGGGACTGTGACTCTGTTTT380.18814675446848542No Hit
CATAGACCAGACTTTTGAAAGAAGCACATGGAACTTTGCCCCAAAAGAGG350.17329306332623656No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTACCCTAAAGCCCTTGTGA340.16834183294548696No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT310.15348814180323808No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTGGGGACTGTGACTCTG300.14853691142248848No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGCTTCCACATGATGGACATCTATG290.14358568104173886No Hit
CATAGATTGCATAGCCATGTGTAGCCAGAGCAGGAATTAGACTCTTGACA270.13368322028023966No Hit
CATAGACATGCTAACATTTCTGGGGATACGGTAGAGAGACTTGGTCTCAT270.13368322028023966No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTATTATTGGATGGGATCTATG240.11882952913799079No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGTTGGAAGTTAGGAAGCCAGCT240.11882952913799079No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCTTTCCCCATTGCTTGTCCTTTC210.10397583799574195No Hit
CATAGACCATCCAGAGGTAATTCTGCTCTATGAGGTTGTCTGGGTGGTTT210.10397583799574195No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)