FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences143378
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2170815.140398108496422No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA55933.900877400995969No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG43433.029056061599409No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA38832.7082258087014743No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA38622.6935792101996126No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG36732.5617598236828525No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT32182.2444168561425046No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG26491.8475637824491902No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT22641.5790428099150495No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC20541.4325768248964275No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA15561.0852432032808381No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA14951.042698321918286No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT14571.0161949532006305No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA14080.9820195566962854No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC13680.9541212738355955No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC13620.9499365314064919No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC12910.9004170793287674No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT12860.8969297939711811No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG12780.8913501373990431No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT12600.8787959101117326No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG11150.7776646347417316No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA10570.7372121245937313No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT9740.6793231876577996No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9400.6556096472262132No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9050.6311986497231095No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCGGTCATTCTTCTCTGGGGGC7820.5454114299264881No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA7670.5349495738537293No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7070.4931021495626944No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG7060.4924046924911772No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA7040.4910097783481427No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC7020.4896148642051082No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA6710.46799369498807347No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCAGCAACAAAAGTCACT6600.46032166720138373No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA6580.45892675305834923No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG6430.44846489698559056No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT5950.4149869575527626No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGACCAAAGCTAGAAACTC5730.3996429019793832No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGGTTCTACACATAGAAGA5480.38220647519145196No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT5340.37244207619021047No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC5300.3696522479041415No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCCATAGAACAGCTAAAAA5250.36616496254655523No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG5180.36128276304593454No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA4920.34314887918648607No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC4820.3361743084713136No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA4760.3319895660422101No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT4480.31246076803972717No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGAGAACATTAGCTT4290.29920908368089943No Hit
CATAGAGAACAGCCCTGAGAGAATGCATGGTTCTACACATAGAGAACAGC4290.29920908368089943No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGACCAAAGCTAGAAACTCCC4260.2971167124663477No Hit
CATAGATGTGCCACATACCTTTCCCAACACTGACGACAGTGAAACAAGAT4260.2971167124663477No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA4210.29362942710876144No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA4130.28804977053662345No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA4060.28316757103600276No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT3980.27758791446386477No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA3830.26712605839110604No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT3770.26294131596200254No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA3730.26015148767593355No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3720.2594540306044163No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA3660.2552692881753128No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACTAGAACAGCTAAAAATCTTGG3570.2489921745316576No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGAGGCACAGGGTAATGGAGGA3560.24829471746014034No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAATCTGCAGCAACAAAAG3480.24271506088800235No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3450.2406226896734506No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACACTGACGACATGTGTGAGAGG3430.23922777553041613No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC3350.23364811895827814No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGTTCTACAC3350.23364811895827814No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA3330.2322532048152436No Hit
CATAGACCAAAGCTAGAAACTCCCATCTATGAGACCAAGTCTCTGCTACC3260.22737100531462287No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGAACTTAGCAACCTGTAC3250.22667354824310562No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACTCTCAGTTGTGTGTGTGGTCT3220.22458117702855387No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG3180.2217913487424849No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCAGGTGCAAATTGTCAGTGTGTC3150.21969897752793316No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGTGTACTCTCAGT3110.21690914924186416No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT3090.21551423509882967No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTATGAGACCAAG3030.21132949266972617No Hit
CATAGATGCTCAGATCTCAAAAGGCTTCTATGAGACCAAGTCTCTGCTAC2960.20644729316910546No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2920.20365746488303646No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT2910.2029600078115192No Hit
CATAGAAGGAGCTGGACTGGATGGACCAGAGGACACTTTGGACTCTGCCT2900.20226255074000196No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTGGGGAAAGAGAGCAC2830.1973803512393812No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA2820.19668289416786394No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA2820.19668289416786394No Hit
CATAGAATACAACACACTCTCTGCCCTGGTCATTCTTCTCTGGGGGCTCT2790.19459052295331222No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2790.19459052295331222No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGGGGTCCAGTGAACTCAA2720.1897083234526915No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCACACTGACGACATGGTTCTACA2720.1897083234526915No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTACACATAGAACAGCT2660.18552358102358799No Hit
CATAGACCTGTGTGTGAGGCATTGTTACACTGACGACATGGTTCTACACA2570.17924646737993277No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT2520.17575918202234653No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA2500.17436426787931203No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACTCTATGAGACCAAGTACTCTC2470.17227189666476028No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTAGAACAGCTAAAAATCTTGGAGC2470.17227189666476028No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGCACATAGACCAAAGCTAGAA2450.17087698252172578No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG2410.1680871542356568No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG2370.1652973259495878No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTACACATAGAGAACAGCTAAAAA2330.1625074976635188No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG2300.16041512644896708No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2200.1534405557337946No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC2190.15274309866227734No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA2180.1520456415907601No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAAACTCCCATCTATGAGACCAAA2160.1506507274477256No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2160.1506507274477256No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTATGAGACAGAATTTGCAAATA2150.14995327037620834No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGACGACATGGTTCT2100.1464659850186221No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA2090.14576852794710485No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACATTAGCTTAGTTAATTA2060.1436761567325531No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGGTTCTACACA2020.14088632844648413No Hit
CATAGAAGGAGCTGGACTGGATGGACTTCTATGAGACCAGGGTGGGGAAA2010.14018887137496688No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2010.14018887137496688No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT1980.13809650016041514No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCACATAGACCAAAGCTAGAAA1940.13530667187434614No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTATGAGGCAAAC1930.1346092148028289No Hit
CATAGAAGTGACCCTCAGCTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT1880.13112192944524265No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGAGGGTAA1860.12972701530220815No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1820.12693718701613915No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA1810.1262397299446219No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG1790.12484481580158742No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1790.12484481580158742No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1770.12344990165855292No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1760.12275244458703567No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCAGGGT1740.12135753044400117No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGGCAAACTAACACAGAAAC1720.11996261630096668No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATAGAACAGCTAAAA1700.11856770215793219No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAACGCAAACTAACACAGAA1690.11787024508641494No Hit
CATAGAGAACAGCCCTGAGAGAATGCGACATGGTTCTACACATAGAGAAC1650.11508041680034593No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACGCAAACTAACACAGA1650.11508041680034593No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1580.1101982172997252No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG1570.10950076022820796No Hit
CATAGATCACCCAGCCCATATTGCACGTAAGGGTGGGGAAAGAGAGCACT1540.10740838901365621No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACACGCACAACTGGCATCTGG1520.10601347487062171No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1510.10531601779910446No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1500.10461856072758723No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)