FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119403
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3347728.036983995377003No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG49864.17577447802819No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG35812.999087125114109No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA30452.5501871812266024No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC23201.9429997571250306No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA22811.9103372612078422No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG22141.854224768221904No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG21421.793924775759403No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA19861.663274792090651No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC19301.6163747979531504No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT9330.7813874023265747No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA8790.736162407979699No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC8000.6699999162500104No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA7940.6649749168781355No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG7450.6239374220078223No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG7380.6180749227406347No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC7080.5929499258812593No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC7030.5887624264046967No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG6550.5485624314296961No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA5720.47904994011875746No Hit
CATAGACCCTTCTCCATGCCACATCATCCATGGGTCCTTTTCACATCATC5580.4673249415843823No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC4870.4078624490171939No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT4870.4078624490171939No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA4830.40451244943594383No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGCATGTTGAGATGAATAA4800.40199994975000625No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCAGTTTTTCCAAATATAAGAT4540.38022495247188093No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA4410.36933745383281824No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT4370.3659874542515682No Hit
CATAGACCCTTCTCCATGCCACATCAGTGTAGGAAAGCAATCACCGCCAG4310.36096245487969314No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTAGGGATTATCAGTAGTGCT4290.3592874550890681No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG4270.3576124552984431No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTGACGACATGGTTCTACACAT4180.35007495624063045No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCATTTCCCCTCTCTCTGAATAACT4000.3349999581250052No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC4000.3349999581250052No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAAAACCACTTGAACATTGCCT3730.3123874609515674No Hit
CATAGACCCTTCTCCATGCCACATCATCAGCATGTTGAGATGAATAATTG3480.2914499635687546No Hit
CATAGATCATGCAAAGAACACAGGCCATGGGTCCTTTTCACATCATCTAT3380.2830749646156294No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA3320.2780499652437543No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG3190.2671624666046917No Hit
CATAGATCACCTACACAGACAGCTTTCCCATGGGTCCTTTTCACATCATC3140.2629749671281291No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACACTGACGACATGGTTCTACAC2990.2504124686984414No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2950.24706246911719137No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGAAAGCAATCACCGCCA2950.24706246911719137No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCATTTCCCCTCTCTCTGAAT2690.225287471839066No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT2670.22361247204844098No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA2610.21858747267656595No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG2480.20769997403750326No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC2460.20602497424687824No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG2230.18676247665469042No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT2190.18341247707344038No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCAGGGATTATCAGTAGTGCTC2110.17671247791094025No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAACAACTGC2080.17419997822500272No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAATGAGACCAACCACACTC2040.17084997864375268No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA2030.17001247874844017No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATAGCAGAGCATGTTGAGATGAAT1970.16498747937656508No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT1950.16331247958594003No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACGGTGTCAGAGATAGCACA1930.16163747979531504No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1920.16079997990000253No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT1910.15996248000469002No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGCTACCGTAGGCTAGTCCGTCACC1880.15744998031875246No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC1870.15661248042343995No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA1850.15493748063281493No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1850.15493748063281493No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGTCTTCTGTGTTTGGTCTATGAG1790.14991248126093984No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA1790.14991248126093984No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1790.14991248126093984No Hit
CATAGAGGGGCATGCTGGATAAATCTACACTGGAGACAGCCGCTCACCTC1740.1457249817843773No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAGCTATATTGGAGGAAAAGT1700.14237498220312722No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG1630.13651248293593965No Hit
CATAGACCCTTCTCCATGCCACATCATTTCCCCTCTCTCTGAATAACTCT1620.13567498304062714No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1610.1348374831453146No Hit
CNTAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA1550.1298124837734395No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA1550.1298124837734395No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT1540.128974983878127No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1520.12729998408750198No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT1460.12227498471562692No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCCGATTTGGACCTGCG1410.11808748523906434No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1370.11473748565781429No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGCAGGAGGGAAGGAAGGGCAAAC1350.11306248586718927No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1320.11054998618125172No Hit
CNTAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA1310.10971248628593921No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1290.1080374864953142No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1270.10636248670468915No Hit
CATAGAAGATCCCATAGCAGCTTTGCCACCCTGAAGTTTGAGAGCAAGTT1270.10636248670468915No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT1260.10552498680937664No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1260.10552498680937664No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAAAACCACTTGAACATTGCCTTTC1250.10468748691406414No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT1210.10133748733281407No Hit
CNTAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC1200.10049998743750156No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)