FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68594
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3124545.550631250546694No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG37855.517975333119515No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA24183.525089657987579No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG16502.4054582033414No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG14502.1138875120272913No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT14192.068694054873604No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT7831.141499256494737No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTTAAAGTGGGGAAAGGAC7161.0438230749045105No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA5290.7712044785258186No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC4960.7230953144589906No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT3960.5773099688019361No Hit
CATAGACCATCCTCCCACCTTGACCTCATCCTCCCATCTCAAGTCTCACT3840.5598157273230895No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC3810.5554421669533779No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT3570.5204536839956847No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG3460.5044172959734088No Hit
CATAGATGACATAGACCTTATACCCTCATCACCCAGTACAGGAGCACCCT3050.4446453042540164No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2960.4315246231448815No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG2880.4198617954923171No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT2820.41111467475289387No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCCATCCTACATGTGTCTA2660.3877890194477651No Hit
CATAGAGCCTGGCATTTGAGGTAAGGGATAGTTTGAGGGTAATGCTCTAG2600.3790418987083418No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGGGGAAGCAAGCACGT2410.35134268303350147No Hit
CATAGAGGGACGGAGGCAAGAGGATAACACTGACACTCTTGGTCTTTGTG2320.3382220019243666No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2200.32072776044552No Hit
CATAGAAGGTGATAATCATGACAGCCAATGTACTCCTATGTAATGTCTTA2190.31926990698894947No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG2030.2959442516838207No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1930.28136571711811525No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1920.27990786366154474No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1900.27699215674840366No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT1890.2755343032918331No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC1710.2492929410735633No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1630.23763011342099893No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG1580.2303408461381462No Hit
CATAGACATGAGTGGCCGAACAGACCAGATGGGGATGGGCAAATGGAGAG1510.22013587194215237No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1500.21867801848558183No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1460.21284660465929967No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA1440.20993089774615856No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG1380.20118377700673531No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1350.19681021663702364No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1330.19389450972388256No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1320.19243665626731202No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATACGGTAGCATTTTAACACA1250.18223168207131818No Hit
CATAGACCATCCTCCCACCTTGACCTCCCGAGTAGCTGGGACTACAGGTG1250.18223168207131818No Hit
CATAGACCATCTGCGCATCCTGTCTGTCCTTTCCCCATCTCCAACCCTCT1240.18077382861474764No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1240.18077382861474764No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAATAGCTGGAACCACAGGCA1220.17785812170160656No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1210.17640026824503602No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTACCTCTTCACAGGG1180.17202670787532437No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1150.16765314750561275No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1120.1632795871359011No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1090.15890602676618945No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1060.15453246639647783No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1060.15453246639647783No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1040.15161675948333675No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAAGGAAGCAAGCATATC970.1414117852873429No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT960.13995393183077237No Hit
CATAGAGGTGAGCGGCTGTCTCCAAAGGCCCAGAGCCTCAGGCTAGGAGT960.13995393183077237No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACACTCCTATGTAAT960.13995393183077237No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG950.13849607837420183No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA900.1312068110913491No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG880.128291104178208No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA870.12683325072163745No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA850.12391754380849636No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTGATGGGTT850.12391754380849636No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA840.12245969035192582No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA840.12245969035192582No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG830.12100183689535528No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA760.11079686269936145No Hit
CATAGCGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA750.10933900924279091No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG730.10642330232964983No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)