FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807447

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807447
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40357
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2129552.76655846569368No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA14733.6499244245112377No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC6881.7047847956983917No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT5081.258765517754045No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT4821.1943405109398617No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT4281.0605347275565578No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC4010.9936318358649058No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC3800.9415962534380653No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT3770.9341625988056594No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG3210.7954010456674182No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA3010.7458433481180464No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC2880.7136308447109547No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC2600.6442500681418342No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT2530.626904873999554No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG2370.5872587159600565No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG2140.5302673637782789No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC2070.5129221696359987No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA1740.43115196867953515No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGGCAAC1630.4038952350273807No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG1540.38159427113016325No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1540.38159427113016325No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1450.35929330723294595No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG1400.34690388284560303No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1290.31964714919344844No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1270.3146913794385113No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1270.3146913794385113No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGCTTGGGTGACAGAGTG1200.29734618529623114No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA1200.29734618529623114No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA990.24531060286939071No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT970.24035483311445352No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGGCA940.2329211784820477No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCGACATGGTTCTACACATAGAACC920.22796540872711055No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGACTTCAGTTGACTATAAGAA910.22548752384964196No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG900.22300963897217335No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG890.22053175409470477No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGAGGAATTCTTGCCAGGGA870.21557598433976757No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG870.21557598433976757No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG860.21309809946229896No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC850.2106202145848304No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG840.2081423297073618No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG840.2081423297073618No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG820.2031865599524246No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG750.18584136581014446No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG740.18336348093267585No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGACATGACTCTTCACTATGTCATC730.1808855960552073No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG700.17345194142280151No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG700.17345194142280151No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA670.1660182867903957No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC660.16354040191292712No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC650.16106251703545854No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA650.16106251703545854No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA620.15362886240305276No Hit
CATAGAGAAGAGAAGGCGACAATGGCACACTGACGACATGGTGGGTGCCT600.14867309264811557No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC570.1412394380157098No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTGGTTCTACACATAGAACCCAAAG570.1412394380157098No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT560.1387615531382412No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG560.1387615531382412No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTAGACCTGCG520.12885001362836684No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG510.12637212875089823No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT510.12637212875089823No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGTAGCTTGGGTGACAGAGTGAGTC510.12637212875089823No Hit
CATAGAGGGTGTTTTTCGGTGTCACACTTCAGTTGACTATAAGAAACACC500.12389424387342964No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT490.12141635899596105No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG480.11893847411849245No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG460.11398270436355527No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT460.11398270436355527No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGTACCTGCG450.11150481948608668No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA440.10902693460861808No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC440.10902693460861808No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGTTTTGGACCTGCG440.10902693460861808No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG430.10654904973114948No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG430.10654904973114948No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG430.10654904973114948No Hit
CATAGAACAAGGCCAGAATTACCCTGCATAGCTTGGGTGACAGAGTGAGT430.10654904973114948No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTACG430.10654904973114948No Hit
TATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG410.1015932799762123No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)