FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807449

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807449
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121310
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC89317.362130079960432No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA69855.75797543483637No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC67005.523040145082845No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA66515.48264776193224No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT40413.331135108399967No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA33882.7928447778418923No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA33132.731019701590965No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA32642.6906273184403595No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27892.299068502184486No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT27562.2718654686340782No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA24201.9948891270299234No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC19551.6115736542741737No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG19391.5983843046739759No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA18351.5126535322726897No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT15931.3131646195696975No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA14751.2158931662682384No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG14221.1722034457175832No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG13091.0790536641661856No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA12821.056796636715852No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA12441.025471931415382No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11180.9216058033138241No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT11090.9141867941637127No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT11050.9108894567636633No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG11000.9067677850136016No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10880.8968757728134531No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC10590.8729700766630946No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT9310.7674552798615117No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA8800.7254142280108812No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC8150.6718324952600775No Hit
CATAGATGCACCAGAAGCCACCTACCATCGGCCGCACTGAAATTGTCTAT8090.6668864891600033No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA7850.6471024647597066No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA7750.6388591212595829No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT7630.6289671090594344No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA7530.6207237655593109No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7220.5951694007089275No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG7180.5918720633088781No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA6590.5432363366581485No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6410.528398318357926No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG6320.5209793092078147No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5670.46739757645701097No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT5530.45585689555683784No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4890.40309949715604654No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4750.3915588162558734No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC4580.37754513230566317No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA4440.36600445140549004No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC4410.363531448355453No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT4300.35446377050531697No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT4100.33797708350506966No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA4080.33632841480504494No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC4050.3338554117550078No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC3920.3231390652048471No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCCCTGGTGGTGCTGGAACTAGTTCT3920.3231390652048471No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3870.31901739345478525No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT3810.3140713873547111No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT3730.3074767125546122No Hit
CATAGATCTGGGAGGTGAAGAGGACAGGAGCTGGGAGGAACAGGGAGATG3600.2967603660044514No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3600.2967603660044514No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA3580.29511169730442666No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT3540.2918143599043772No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3370.277800675954167No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC3250.2679086637540186No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3120.2571923172038579No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT2920.2407056302036106No Hit
CATAGAGCATCCTCGTAATAGCAAACATTACACTGACGACAATGGGCACA2820.23246228670348695No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCACACTGACGACAATGGGCAC2790.22998928365344984No Hit
CATAGATGCACCAGAAGCCACCTACCTTCTCAGCACAATGGGCACACTTA2690.22174594015332616No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTGGTGAAAAGTAGGGGACAG2570.21185392795317778No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT2560.21102959360316545No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA2470.20361058445305416No Hit
CATAGACCCCCATGCAACCACATCTATAGGGCAAGTGTATGGTCAGTTCT2420.19948891270299232No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTAGAACAAGGGCATGGTCAA2420.19948891270299232No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT2410.19866457835297996No Hit
CATAGATGCACCAGAAGCCACCTACCCACTGAGGTTCTTCAACACAGCTA2380.19619157530294284No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA2380.19619157530294284No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC2310.1904212348528563No Hit
CATAGAATTCCCCAATGTCCTGTGCACAGTTTGAGGATGACTTATGGAAT2290.18877256615283158No Hit
CATAGATGTCCCCATTCATCCTGCAACCACAGCCCAGTTTTCCTTCTCTA2160.17805621960267085No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT2040.16816420740252247No Hit
CATAGACAGAACACCACACCCCTGTCCACAGCCCAGTTTTCCTTCTCTAT2020.16651553870249775No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGGGCAAGTGTATGGTCAGT2020.16651553870249775No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA2000.16486687000247302No Hit
CATAGACAGAACACCACACCCCTGTCACACTGACGACAATGGGCACACTT1960.16156953260242354No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG1920.1582721952023741No Hit
CATAGAATTGCCTACTTTGGGACCCATTGCAAACAGAATGGGACCCATCT1790.14755584865221333No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1730.14260984255213915No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA1700.14013683950210204No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC1690.1393125051520897No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGACCTTTTAGCTATTAAGA1680.13848817080207732No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG1660.1368395021020526No Hit
CATAGATGCGCCAGGGTAAAGTCATACACTGACGACATGGTTCTACACAT1630.13436649905201548No Hit
CATAGATGTCCCCATTCATCCTGCAACTCTCCTGGGCCCATAATACACTT1560.12859615860192894No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC1550.12777182425191658No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA1530.12612315555189185No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAGAACAAGGGCATG1480.12200148380183003No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGACCCCCAAGTATATGACACATT1450.11952848075179293No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT1450.11952848075179293No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT1420.11705547770175583No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1400.1154068090017311No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTGACATCCCAACCACAC1400.1154068090017311No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCTGGCAAAAGGGTAAG1400.1154068090017311No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTAAGGATGACTTATGGAAT1390.11458247465171874No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG1350.11128513725166929No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGACGACAAGGTTTTCCGGC1320.10881213420163217No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCCTTTACCTACCTTCTCAGCTC1250.10304179375154561No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT1250.10304179375154561No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)